myRT

myRT report for GCA_002553975.1_ASM255397v1

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Seq: PCZD01000102.1 Lactobacillus sp. UMNPBX6 NODE_102_length_1934_cov_502.29, whole genome shotgun sequence (1934 bp)
Overview 1 RT 1: 66-1152 bp Neighborhood of RT #1 [66, 1376] RVT-GII GIIM Feature: gene Location: 66-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267-885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267-885 bp Feature: domain Description: GIIM Note: maturase Location: 939-1152 bp Feature: domain Description: GIIM Note: maturase Location: 939-1 1 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PCZD01000123.1 Lactobacillus sp. UMNPBX6 NODE_123_length_954_cov_32.9878, whole genome shotgun sequence (954 bp)
Overview 1 RT 1: 33-225 bp Neighborhood of RT #1 [33, 881] RVT-UNC Feature: gene Location: 33-881 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 48-225 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 48-2 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12/RVT-UG13/RVT-UG8/RVT-UG5(RVT-UNC)

Seq: PCZD01000041.1 Lactobacillus sp. UMNPBX6 NODE_41_length_16072_cov_91.1671, whole genome shotgun sequence (16072 bp)
Overview 1 RT 1: 1-3774 bp Neighborhood of RT #1 [1, 3812] DDE_5 RVT-UNC Abi_C RmlD_sub_bind Feature: gene Location: 1-876 bp Feature: domain Description: DDE_5 Location: 223-775 bp Feature: domain Description: DDE_5 Location: 223 -775 bp Feature: gene Location: 1012-1713 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1492-1702 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1492-1702 bp Feature: gene Location: 1731-2660 bp Feature: domain Description: Abi_C Location: 2421-2643 bp Feature: domain Description: Abi_C Location: 2421-2643 bp Feature: gene Location: 2826-3812 bp Feature: domain Description: RmlD_sub_bind Location: 2829-3774 bp Feature: domain Description: RmlD_sub_bind Location: 2829-3 774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT-UG12/RVT-AbiK/RVT-AbiP2/RVT-UG14(RVT-UNC), Abi_C (pfam14355), RmlD_sub_bind (pfam04321)