myRT

myRT report for GCA_002553995.1_ASM255399v1

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Seq: PCZE01000003.1 Lactobacillus sp. UMNPBX5 NODE_3_length_139266_cov_52.0491, whole genome shotgun sequence (139266 bp)
Overview 1 RT 1: 57605-62044 bp Neighborhood of RT #1 [57605, 62073] HTH_XRE TPR TPR RVT-GII RVT-GII GIIM ARA1 PBP1_AraR Feature: gene Location: 57605-58447 bp Feature: domain Description: HTH_XRE Location: 57620-57782 bp Feature: domain Description: HTH_XRE Location: 57620-57782 bp Feature: domain Description: TPR Location: 57836-58019 bp Feature: domain Description: TPR Location: 57836-5801 9 bp Feature: domain Description: TPR Location: 58064-58373 bp Feature: domain Description: TPR Location: 58064-58373 bp Feature: gene Location: 58513-58734 bp Feature: gene Location: 58937-59611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59255-59597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59255-59597 bp Feature: gene Location: 59589-60326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59610-59880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5961 0-59880 bp Feature: domain Description: GIIM Note: maturase Location: 59934-60162 bp Feature: domain Description: GIIM Note: maturase Location: 59934-601 62 bp Feature: gene Location: 60411-61250 bp Feature: domain Description: ARA1 Location: 60435-61200 bp Feature: domain Description: ARA1 Location: 60435-61 200 bp Feature: gene Location: 61252-62073 bp Feature: domain Description: PBP1_AraR Location: 61255-62044 bp Feature: domain Description: PBP1 _AraR Location: 61 255-62044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), TPR (smart00028), RVT-GII, GIIM (pfam08388), ARA1 (COG0656), PBP1_AraR (cd01541)