myRT

myRT report for GCA_002554045.1_ASM255404v1

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Seq: PCZC01000035.1 Lactobacillus sp. UMNPBX7 SNF2W3B2M2S3137_156_12, whole genome shotgun sequence (9339 bp)
Overview 1 RT 1: 5053-9336 bp Neighborhood of RT #1 [5053, 9338] trehalose_treC MFS_SLC45_SUC RVT-GII Feature: gene Location: 5053-6735 bp Feature: domain Description: trehalose_treC Location: 5071-6730 bp Feature: domain Description: trehalose_treC Location: 5071 -6730 bp Feature: gene Location: 6753-8138 bp Feature: domain Description: MFS_SLC45_SUC Location: 6846-8088 bp Feature: domain Description: MFS_SLC45_SUC Location: 6846-8088 bp Feature: gene Location: 8661-9338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8979-9336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8979-9336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trehalose_treC (TIGR02403), MFS_SLC45_SUC (cd17313), RVT-GII

Seq: PCZC01000059.1 Lactobacillus sp. UMNPBX7 SNF2W3B2M2S3164_152_26, whole genome shotgun sequence (30825 bp)
Overview 1 RT 1: 12378-18563 bp Neighborhood of RT #1 [12378, 18622] PBP2_GlnP HisM PRK05431 RVT-GII GIIM RAYT Feature: gene Location: 12378-13841 bp Feature: domain Description: PBP2_GlnP Location: 12489-13158 bp Feature: domain Description: PBP2 _GlnP Location: 12 489-13158 bp Feature: domain Description: HisM Location: 13212-13836 bp Feature: domain Description: HisM Location: 132 12 -13836 bp Feature: gene Location: 14110-15417 bp Feature: domain Description: PRK05431 Location: 14113-15379 bp Feature: domain Description: PRK05431 Location: 14113-15379 bp Feature: gene Location: 17198-17575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17210-17369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 10-17369 bp Feature: domain Description: GIIM Note: maturase Location: 17426-17573 bp Feature: domain Description: GIIM Note: maturase Location: 1742 6-17573 bp Feature: gene Location: 17901-18380 bp Feature: gene Location: 18398-18622 bp Feature: domain Description: RAYT Location: 18401-18563 bp Feature: domain Description: RAYT Location: 18401-18563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_GlnP (cd13619), HisM (COG0765), PRK05431 (seryl-tRNA synthetase; Provisional), RVT-GII, GIIM (pfam08388), RAYT (COG1943)

Seq: PCZC01000062.1 Lactobacillus sp. UMNPBX7 SNF2W3B2M2S3167_133_18, whole genome shotgun sequence (6126 bp)
Overview 1 RT 1: 3396-5911 bp Neighborhood of RT #1 [3396, 5991] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C group_II_RT_mat RVT-GII Feature: gene Location: 3396-4958 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3468-3723 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3 468-3 723 bp Feature: domain Description: zf-IS66 Location: 3744-3879 bp Feature: domain Description: zf-IS66 Location: 3 744-3 879 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3942-4788 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3 942-4788 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4809-4920 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4809-4920 bp Feature: gene Location: 5034-5552 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5037-5352 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 503 7-53 52 bp Feature: gene Location: 5542-5991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5551-5911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5551-5911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), group_II_RT_mat (TIGR04416), RVT-GII

Seq: PCZC01000064.1 Lactobacillus sp. UMNPBX7 SNF2W3B2M2S3169_551_34, whole genome shotgun sequence (1200 bp)
Overview 1 RT 1: 86-932 bp Neighborhood of RT #1 [86, 1096] RVT-GII GIIM Feature: gene Location: 86-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-650 bp Feature: domain Description: GIIM Note: maturase Location: 704-932 bp Feature: domain Description: GIIM Note: maturase Location: 704 -932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PCZC01000073.1 Lactobacillus sp. UMNPBX7 SNF2W3B2M2S3182_197_70, whole genome shotgun sequence (2546 bp)
Overview 1 RT 1: 79-2185 bp Neighborhood of RT #1 [79, 2185] GIIM RVT-GII Feature: gene Location: 79-411 bp Feature: domain Description: GIIM Note: maturase Location: 88-247 bp Feature: domain Description: GIIM Note: maturase Location: 88-247 bp Feature: gene Location: 427-1323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607-1225 bp Feature: gene Location: 1327-1461 bp Feature: gene Location: 2036-2185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII