myRT

myRT report for GCA_002554485.1_ASM255448v1

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Seq: PDEE01000003.1 Escherichia coli strain FDAARGOS_402 pRIID_106.contig.2, whole genome shotgun sequence (75563 bp)
Overview 1 RT 1: 27218-30885 bp Neighborhood of RT #1 [27218, 30885] DDE_Tnp_1 InsG RVT-GII GIIM PHA02517 Feature: gene Location: 27218-27478 bp Feature: domain Description: DDE_Tnp_1 Location: 27224-27410 bp Feature: domain Description: DDE_Tnp_1 Location: 27224-2741 0 bp Feature: gene Location: 27559-28329 bp Feature: domain Description: InsG Location: 27562-28198 bp Feature: domain Description: InsG Location: 27562-281 98 bp Feature: gene Location: 28422-29768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28518-29250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2851 8-29250 bp Feature: domain Description: GIIM Note: maturase Location: 29325-29523 bp Feature: domain Description: GIIM Note: maturase Location: 29325-29523 bp Feature: gene Location: 29885-30331 bp Feature: domain Description: PHA02517 Location: 29888-30329 bp Feature: domain Description: PHA0251 7 Location: 29888-30329 bp Feature: gene Location: 30535-30885 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: PDEE01000004.1 Escherichia coli strain FDAARGOS_402 pRIID_106.contig.3, whole genome shotgun sequence (5288218 bp)
Overview 1 RT 1: 2888319-2891233 bp 2 RT 2: 3084133-3090214 bp 3 RT 3: 3106366-3111544 bp 4 RT 4: 4513405-4516651 bp 5 RT 5: 4530471-4534505 bp Neighborhood of RT #1 [2888319, 2891298] RVT-GII GIIM PHA02517 Neighborhood of RT #2 [3084133, 3090216] InsE PHA02517 RVT-GII GIIM PHA02517 TonB-siderophor Neighborhood of RT #3 [3106366, 3111609] ESPR Peptidase_S6 PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #4 [4513405, 4516653] PHA02517 YkfC RVT-GII group_II_RT_mat PHA02517 Neighborhood of RT #5 [4530471, 4534570] Peptidase_S6 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2888319-2888462 bp Feature: gene Location: 2888487-2888690 bp Feature: gene Location: 2888758-2890281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2889031-2889763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 889031-2 889763 bp Feature: domain Description: GIIM Note: maturase Location: 2889838-2890036 bp Feature: domain Description: GIIM Note: maturase Location: 2 889838-2 890036 bp Feature: gene Location: 2890235-2890660 bp Feature: gene Location: 2890873-2891298 bp Feature: domain Description: PHA02517 Location: 2890897-2891233 bp Feature: domain Description: PHA02 517 Location: 2 890897-2 8912 33 bp Feature: gene Location: 3084133-3084459 bp Feature: domain Description: InsE Location: 3084136-3084457 bp Feature: domain Description: InsE Location: 3084136-3084457 bp Feature: gene Location: 3084657-3084938 bp Feature: domain Description: PHA02517 Location: 3084663-3084873 bp Feature: domain Description: PHA02 517 Location: 3084663-3084873 bp Feature: gene Location: 3085530-3087053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3085803-3086535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3085803-3086535 bp Feature: domain Description: GIIM Note: maturase Location: 3086610-3086808 bp Feature: domain Description: GIIM Note: maturase Location: 3086610-3086808 bp Feature: gene Location: 3087230-3087616 bp Feature: domain Description: PHA02517 Location: 3087233-3087614 bp Feature: domain Description: PHA02 517 Location: 30872 33-3087614 bp Feature: gene Location: 3088018-3090216 bp Feature: domain Description: TonB-siderophor Location: 3088153-3090214 bp Feature: domain Description: TonB-siderophor Location: 3088153-30902 14 bp Feature: gene Location: 3106366-3108288 bp Feature: domain Description: ESPR Location: 3106369-3106438 bp Feature: domain Description: ESPR Location: 3106369-3106438 bp Feature: domain Description: Peptidase_S6 Location: 3106519-3108193 bp Feature: domain Description: Peptidase_S6 Location: 3106519-3108193 bp Feature: gene Location: 3108453-3108839 bp Feature: domain Description: PHA02517 Location: 3108456-3108837 bp Feature: domain Description: PHA02 517 Location: 3108456-3108837 bp Feature: gene Location: 3109016-3110362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3109112-3109844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3109112 -3109844 bp Feature: domain Description: GIIM Note: maturase Location: 3109919-3110117 bp Feature: domain Description: GIIM Note: maturase Location: 3109919-3110117 bp Feature: gene Location: 3110492-3110917 bp Feature: gene Location: 3111130-3111609 bp Feature: domain Description: PHA02517 Location: 3111190-3111544 bp Feature: domain Description: PHA02 517 Location: 3111190-3111544 bp Feature: gene Location: 4513405-4513977 bp Feature: domain Description: PHA02517 Location: 4513558-4513912 bp Feature: domain Description: PHA02 517 Location: 4513558-4513912 bp Feature: gene Location: 4514569-4514736 bp Feature: domain Description: YkfC Location: 4514578-4514722 bp Feature: domain Description: YkfC Location: 4514578-451472 2 bp Feature: gene Location: 4514745-4515503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4514841-4515300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4514841-4515300 bp Feature: gene Location: 4515518-4516090 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4515524-4515836 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 451552 4-4515836 bp Feature: gene Location: 4516267-4516653 bp Feature: domain Description: PHA02517 Location: 4516270-4516651 bp Feature: domain Description: PHA02 517 Location: 45162 70-4516651 bp Feature: gene Location: 4530471-4531277 bp Feature: domain Description: Peptidase_S6 Location: 4530597-4531266 bp Feature: domain Description: Peptidase_S6 Location: 4530597-45312 66 bp Feature: gene Location: 4531468-4531854 bp Feature: domain Description: PHA02517 Location: 4531471-4531852 bp Feature: domain Description: PHA02 517 Location: 4531471-4531852 bp Feature: gene Location: 4532031-4533377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4532127-4532859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4532 12 7-4532 859 bp Feature: domain Description: GIIM Note: maturase Location: 4532934-4533132 bp Feature: domain Description: GIIM Note: maturase Location: 4532 934-4533132 bp Feature: gene Location: 4533507-4533932 bp Feature: gene Location: 4534145-4534570 bp Feature: domain Description: PHA02517 Location: 4534169-4534505 bp Feature: domain Description: PHA02 517 Location: 4534169-4534505 bp Sorry, your browser does not support inline SVG.
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