myRT

myRT report for GCA_002555365.1_ASM255536v1

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Seq: NUCJ01000119.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig119_140514, whole genome shotgun sequence (13855 bp)
Overview 1 RT 1: 4766-13854 bp Neighborhood of RT #1 [4766, 13854] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 Feature: gene Location: 4766-5857 bp Feature: domain Description: RapH_N Location: 4787-4958 bp Feature: domain Description: RapH_N Location: 4787-4958 bp Feature: domain Description: TPR Location: 5093-5360 bp Feature: domain Description: TPR Location: 5093-5360 bp Feature: domain Description: TPR Location: 5405-5816 bp Feature: domain Description: TPR Location: 5405-581 6 bp Feature: gene Location: 6320-6547 bp Feature: domain Description: PRK13922 Location: 6407-6527 bp Feature: domain Description: PRK1 3922 Location: 6407-6527 bp Feature: gene Location: 6823-12462 bp Feature: domain Description: AE_Prim_S_like Location: 7033-7252 bp Feature: domain Description: AE_Prim_S_like Location: 7033-7252 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8239-8893 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 8239-8893 bp Feature: gene Location: 12901-13326 bp Feature: gene Location: 13336-13854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10

Seq: NUCJ01000170.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig170_140514, whole genome shotgun sequence (5456 bp)
Overview 1 RT 1: 742-5226 bp Neighborhood of RT #1 [742, 5363] RVT-GII HNHc CwlT_like RVT-GII HNHc Feature: gene Location: 742-2511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000-1696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000-1696 bp Feature: domain Description: HNHc Note: nucleases Location: 2257-2395 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 57-2 395 bp Feature: gene Location: 2627-2794 bp Feature: domain Description: CwlT_like Location: 2669-2777 bp Feature: domain Description: CwlT_like Location: 2 669-2 777 bp Feature: gene Location: 3037-3255 bp Feature: gene Location: 3567-5363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3825-4530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382 5-4530 bp Feature: domain Description: HNHc Note: nucleases Location: 5091-5226 bp Feature: domain Description: HNHc Note: nucleases Location: 5091-52 2 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NUCJ01000175.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig175_140514, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 117-1917 bp Neighborhood of RT #1 [117, 1940] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 117-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 81-1215 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUCJ01000178.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig178_140514, whole genome shotgun sequence (7372 bp)
Overview 1 RT 1: 3606-7083 bp Neighborhood of RT #1 [3606, 7214] RVT-GII HNHc Feature: gene Location: 3606-4697 bp Feature: gene Location: 5026-5244 bp Feature: gene Location: 5418-7214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5712-6408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5712-64 08 bp Feature: domain Description: HNHc Note: nucleases Location: 7008-7083 bp Feature: domain Description: HNHc Note: nucleases Location: 7008-7083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUCJ01000211.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig211_140514, whole genome shotgun sequence (1404 bp)
Overview 1 RT 1: 1-1096 bp Neighborhood of RT #1 [1, 1170] RVT-GII GIIM HNHc Feature: gene Location: 1-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-301 bp Feature: domain Description: GIIM Note: maturase Location: 415-583 bp Feature: domain Description: GIIM Note: maturase Location: 415 -5 83 bp Feature: domain Description: HNHc Note: nucleases Location: 931-1096 bp Feature: domain Description: HNHc Note: nucleases Location: 931-1096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NUCJ01000225.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig225_140514, whole genome shotgun sequence (1254 bp)
Overview 1 RT 1: 3-588 bp Neighborhood of RT #1 [3, 590] RVT-GII Feature: gene Location: 3-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUCJ01000251.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig251_140514, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 132-1926 bp Neighborhood of RT #1 [132, 1955] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 132-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1230 bp Feature: domain Description: Intron_maturas2 Location: 1302-1620 bp Feature: domain Description: Intron_maturas2 Location: 1302-1620 bp Feature: domain Description: HNHc Note: nucleases Location: 1773-1926 bp Feature: domain Description: HNHc Note: nucleases Location: 17 7 3-1926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUCJ01000257.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig257_140514, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 712-2377 bp Neighborhood of RT #1 [712, 2502] RVT-GII HNHc Feature: gene Location: 712-2502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1705 bp Feature: domain Description: HNHc Note: nucleases Location: 2245-2377 bp Feature: domain Description: HNHc Note: nucleases Location: 2245-2377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUCJ01000008.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig8_140514, whole genome shotgun sequence (53100 bp)
Overview 1 RT 1: 21493-28722 bp Neighborhood of RT #1 [21493, 28722] KOG1000 KOG1000 RVT-GII GIIM Feature: gene Location: 21493-22206 bp Feature: gene Location: 22223-24625 bp Feature: domain Description: KOG1000 Location: 22931-23147 bp Feature: domain Description: KOG1000 Location: 229 31-23147 bp Feature: domain Description: KOG1000 Location: 23750-24083 bp Feature: domain Description: KOG1000 Location: 23750-24083 bp Feature: gene Location: 24903-26768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25203-25908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25203-259 08 bp Feature: domain Description: GIIM Note: maturase Location: 25995-26178 bp Feature: domain Description: GIIM Note: maturase Location: 259 9 5-26178 bp Feature: gene Location: 27515-28423 bp Feature: gene Location: 28495-28722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, GIIM (pfam08388)

Seq: NUCJ01000095.1 Bacillus thuringiensis strain AFS018409 AFS018409_101_H11_Contig95_140514, whole genome shotgun sequence (1975 bp)
Overview 1 RT 1: 167-1744 bp Neighborhood of RT #1 [167, 1827] RVT-GII GIIM Feature: gene Location: 167-346 bp Feature: gene Location: 496-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)