myRT

myRT report for GCA_002555465.1_ASM255546v1

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Seq: NUCW01000016.1 Bacillus toyonensis strain AFS014939 AFS014939_93_B4_Contig16_140618, whole genome shotgun sequence (197978 bp)
Overview 1 RT 1: 145707-153037 bp Neighborhood of RT #1 [145707, 153042] 2A0118 PurR RVT-UG8 RVT-UG3 PRK00024 Feature: gene Location: 145707-146987 bp Feature: domain Description: 2A0118 Location: 145737-146925 bp Feature: domain Description: 2A01 1 8 Location: 1 45737-1 46925 bp Feature: gene Location: 147077-148078 bp Feature: domain Description: PurR Location: 147086-148070 bp Feature: domain Description: PurR Location: 1 47086-1 48070 bp Feature: gene Location: 148451-150409 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 148940-149390 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 48940-1 49390 bp Feature: gene Location: 150694-151833 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 150874-151333 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 50874-1 51 333 bp Feature: gene Location: 152065-152208 bp Feature: gene Location: 152545-153042 bp Feature: domain Description: PRK00024 Location: 152608-153037 bp Feature: domain Description: PRK00024 Location: 1 52608-1 53037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2A0118 (TIGR00897), PurR (COG1609), RVT-UG8, RVT-UG3, PRK00024 (DNA repair protein RadC)

Seq: NUCW01000049.1 Bacillus toyonensis strain AFS014939 AFS014939_93_B4_Contig49_140618, whole genome shotgun sequence (13013 bp)
Overview 1 RT 1: 1-4391 bp Neighborhood of RT #1 [1, 4414] RVT-GII Intron_maturas2 HNHc COG1787 PRK09064 Feature: gene Location: 1-159 bp Feature: gene Location: 747-2561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011-1845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011-1845 bp Feature: domain Description: Intron_maturas2 Location: 1923-2259 bp Feature: domain Description: Intron_maturas2 Location: 192 3-2 2 59 bp Feature: domain Description: HNHc Note: nucleases Location: 2355-2535 bp Feature: domain Description: HNHc Note: nucleases Location: 2 355-2 535 bp Feature: gene Location: 2686-3006 bp Feature: domain Description: COG1787 Location: 2695-2968 bp Feature: domain Description: COG1787 Location: 2 695-2 968 bp Feature: gene Location: 3182-4414 bp Feature: domain Description: PRK09064 Location: 3188-4391 bp Feature: domain Description: PRK09064 Location: 3188-4391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), COG1787 (Endonuclease, HJR/Mrr/RecB family ), PRK09064 (5-aminolevulinate synthase; Validated)

Seq: NUCW01000084.1 Bacillus toyonensis strain AFS014939 AFS014939_93_B4_Contig84_140618, whole genome shotgun sequence (7235 bp)
Overview 1 RT 1: 112-3473 bp Neighborhood of RT #1 [112, 3589] YfzA RVT-Retrons Lrp Feature: gene Location: 112-405 bp Feature: domain Description: YfzA Location: 127-394 bp Feature: domain Description: YfzA Location: 127-3 94 bp Feature: gene Location: 687-1691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 837-1383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83 7-13 83 bp Feature: gene Location: 1866-2765 bp Feature: gene Location: 3005-3589 bp Feature: domain Description: Lrp Location: 3326-3473 bp Feature: domain Description: Lrp Location: 3 3 26-3 473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfzA (pfam14118), RVT-Retrons, Lrp (COG1522)