myRT

myRT report for GCA_002555945.1_ASM255594v1

Download annotations/find similar RTs

Seq: NUEL01000016.1 Bacillus wiedmannii strain AFS004017 AFS004017_102_A8_Contig16_140514, whole genome shotgun sequence (83291 bp)
Overview 1 RT 1: 39133-45707 bp 2 RT 2: 68917-75947 bp Neighborhood of RT #1 [39133, 45707] RseC_MucC RVT-GII RVT-GII HNHc DUF3854 Neighborhood of RT #2 [68917, 75947] Ftsk_gamma Ftsk_gamma RVT-GII rpsA Feature: gene Location: 39133-39747 bp Feature: gene Location: 39865-40044 bp Feature: domain Description: RseC_MucC Location: 39877-40039 bp Feature: domain Description: RseC_MucC Location: 39877-40039 bp Feature: gene Location: 40174-40854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40432-40852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40432-40852 bp Feature: gene Location: 41409-41651 bp Feature: gene Location: 41968-43767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42265-42958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42265-42958 bp Feature: domain Description: HNHc Note: nucleases Location: 43516-43654 bp Feature: domain Description: HNHc Note: nucleases Location: 4351 6-43654 bp Feature: gene Location: 44628-45419 bp Feature: domain Description: DUF3854 Location: 45048-45390 bp Feature: domain Description: DUF3854 Location: 45048-45390 bp Feature: gene Location: 45483-45707 bp Feature: gene Location: 68917-70560 bp Feature: domain Description: Ftsk_gamma Location: 69517-69694 bp Feature: domain Description: Ftsk_gamma Location: 6951 7-69694 bp Feature: domain Description: Ftsk_gamma Location: 69847-69982 bp Feature: domain Description: Ftsk_gamma Location: 69847-69982 bp Feature: gene Location: 71689-71910 bp Feature: gene Location: 71917-73887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72238-72973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72238-72973 bp Feature: gene Location: 74070-75011 bp Feature: domain Description: rpsA Location: 74295-74832 bp Feature: domain Description: rpsA Location: 74295-74832 bp Feature: gene Location: 75021-75947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RseC_MucC (pfam04246), RVT-GII, HNHc (smart00507), DUF3854 (pfam12965), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NUEL01000069.1 Bacillus wiedmannii strain AFS004017 AFS004017_102_A8_Contig69_140514, whole genome shotgun sequence (10376 bp)
Overview 1 RT 1: 3748-9769 bp Neighborhood of RT #1 [3748, 9769] RhaT VOC_Bs_YwkD_like RVT-GII HNHc Glyco_tranf_2_4 Feature: gene Location: 3748-4656 bp Feature: domain Description: RhaT Location: 3763-4612 bp Feature: domain Description: RhaT Location: 3763-4612 bp Feature: gene Location: 4856-5281 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 4895-5168 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 4895-5168 bp Feature: gene Location: 6260-8059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6557-7250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6557-72 50 bp Feature: domain Description: HNHc Note: nucleases Location: 7808-7946 bp Feature: domain Description: HNHc Note: nucleases Location: 7808-7946 bp Feature: gene Location: 8226-9020 bp Feature: domain Description: Glyco_tranf_2_4 Location: 8265-8523 bp Feature: domain Description: Glyco_tranf_2 _4 Location: 82 65-852 3 bp Feature: gene Location: 9596-9769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhaT (TIGR00776), VOC_Bs_YwkD_like (cd08352), RVT-GII, HNHc (smart00507), Glyco_tranf_2_4 (pfam13704)