myRT

myRT report for GCA_002556365.1_ASM255636v1

Download annotations/find similar RTs

Seq: NUEU01000013.1 Bacillus sp. AFS002410 AFS002410_116_C10_Contig18_140618, whole genome shotgun sequence (87325 bp)
Overview 1 RT 1: 65336-70046 bp Neighborhood of RT #1 [65336, 70046] SR_ResInv RVT-UG15 Feature: gene Location: 65336-65686 bp Feature: gene Location: 65791-66492 bp Feature: domain Description: SR_ResInv Location: 65896-66301 bp Feature: domain Description: SR_ResInv Location: 65896-66301 bp Feature: gene Location: 67792-69393 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 68224-68629 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 68224-68629 bp Feature: gene Location: 69665-69793 bp Feature: gene Location: 69903-70046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), RVT-UG15

Seq: NUEU01000017.1 Bacillus sp. AFS002410 AFS002410_116_C10_Contig22_140618, whole genome shotgun sequence (75704 bp)
Overview 1 RT 1: 71912-75600 bp Neighborhood of RT #1 [71912, 75701] COG3666 DDE_Tnp_1_6 RVT-GII GIIM RVT-GII Feature: gene Location: 71912-72436 bp Feature: domain Description: COG3666 Location: 71933-72383 bp Feature: domain Description: COG3666 Location: 71933-72 383 bp Feature: gene Location: 72623-73165 bp Feature: domain Description: DDE_Tnp_1_6 Location: 72902-73130 bp Feature: domain Description: DDE_Tnp_1_6 Location: 72 902 -73130 bp Feature: gene Location: 74087-75331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74291-74948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 91-74948 bp Feature: domain Description: GIIM Note: maturase Location: 75029-75257 bp Feature: domain Description: GIIM Note: maturase Location: 7502 9-752 57 bp Feature: gene Location: 75411-75701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75417-75600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75417-75600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388)

Seq: NUEU01000091.1 Bacillus sp. AFS002410 AFS002410_116_C10_Contig46_140618, whole genome shotgun sequence (20451 bp)
Overview 1 RT 1: 11422-18740 bp Neighborhood of RT #1 [11422, 18748] Inhibitor_I9 Peptidases_S8_subtilisin_Vpr-like fn3_5 Dockerin_II RVT-GII LysR Feature: gene Location: 11422-11589 bp Feature: gene Location: 11688-15869 bp Feature: domain Description: Inhibitor_I9 Location: 11946-12234 bp Feature: domain Description: Inhibitor_I9 Location: 11946-1223 4 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 12348-13683 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 123 48-13 683 bp Feature: domain Description: fn3_5 Location: 13824-14091 bp Feature: domain Description: fn3 _5 Location: 13 824-14091 bp Feature: domain Description: Dockerin_II Location: 15630-15774 bp Feature: domain Description: Dockerin_II Location: 1563 0-15774 bp Feature: gene Location: 17200-17724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17203-17620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17203 -17620 bp Feature: gene Location: 17803-17997 bp Feature: gene Location: 18548-18748 bp Feature: domain Description: LysR Location: 18572-18740 bp Feature: domain Description: LysR Location: 18572-18740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Inhibitor_I9 (pfam05922), Peptidases_S8_subtilisin_Vpr-like (cd07474), fn3_5 (pfam06280), Dockerin_II (cd14254), RVT-GII, LysR (COG0583)

Seq: NUEU01000107.1 Bacillus sp. AFS002410 AFS002410_116_C10_Contig62_140618, whole genome shotgun sequence (1218 bp)
Overview 1 RT 1: 1-1217 bp Neighborhood of RT #1 [1, 1217] RVT-GII Feature: gene Location: 1-708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256-703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256-703 bp Feature: gene Location: 672-938 bp Feature: gene Location: 1050-1217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUEU01000044.1 Bacillus sp. AFS002410 AFS002410_116_C10_Contig80_140618, whole genome shotgun sequence (610 bp)
Overview 1 RT 1: 1-229 bp Neighborhood of RT #1 [1, 609] RVT-GII Feature: gene Location: 1-609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13-229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13-229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII