myRT

myRT report for GCA_002556425.1_ASM255642v1

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Seq: NUER01000032.1 Bacillus wiedmannii strain AFS002707 AFS002707_102_B5_Contig32_140514, whole genome shotgun sequence (54876 bp)
Overview 1 RT 1: 14805-18768 bp Neighborhood of RT #1 [14805, 18768] PHA02517 rve_2 RVT-UNC SLATT_5 Feature: gene Location: 14805-15095 bp Feature: domain Description: PHA02517 Location: 14808-15084 bp Feature: domain Description: PHA0251 7 Location: 1 4808-1 5084 bp Feature: gene Location: 15221-15358 bp Feature: domain Description: rve_2 Location: 15227-15308 bp Feature: domain Description: rve_2 Location: 1 5227-1 5308 bp Feature: gene Location: 15487-16911 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 15949-16342 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 5949-1 6342 bp Feature: gene Location: 16924-17640 bp Feature: domain Description: SLATT_5 Location: 16960-17596 bp Feature: domain Description: SLATT_5 Location: 1 6960-1 7596 bp Feature: gene Location: 17848-18768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), rve_2 (pfam13333), RVT-AbiA/RVT-Retrons/RVT-UG3/RVT-UG23(RVT-UNC), SLATT_5 (pfam18160)

Seq: NUER01000052.1 Bacillus wiedmannii strain AFS002707 AFS002707_102_B5_Contig52_140514, whole genome shotgun sequence (5790 bp)
Overview 1 RT 1: 484-3730 bp Neighborhood of RT #1 [484, 3750] RVT-GII HNHc Phage_holin_5_2 XhlA Feature: gene Location: 484-2283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781-1474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781-1474 bp Feature: domain Description: HNHc Note: nucleases Location: 2032-2170 bp Feature: domain Description: HNHc Note: nucleases Location: 2 032 -2 170 bp Feature: gene Location: 3230-3469 bp Feature: domain Description: Phage_holin_5_2 Location: 3275-3425 bp Feature: domain Description: Phage_holin_5_2 Location: 32 75-342 5 bp Feature: gene Location: 3469-3750 bp Feature: domain Description: XhlA Location: 3532-3730 bp Feature: domain Description: XhlA Location: 3532 -3730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Phage_holin_5_2 (pfam16079), XhlA (pfam10779)