myRT

myRT report for GCA_002557145.1_ASM255714v1

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Seq: NUBC01000019.1 Bacillus toyonensis strain AFS025179 AFS025179_55_H4_Contig19_140312, whole genome shotgun sequence (78044 bp)
Overview 1 RT 1: 60096-72993 bp Neighborhood of RT #1 [60096, 73085] CwlT_like Spr RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc VirB4_CagE AAA_10 TcpE Feature: gene Location: 60096-60692 bp Feature: gene Location: 60744-61457 bp Feature: domain Description: CwlT_like Location: 60843-61032 bp Feature: domain Description: CwlT_like Location: 60843-61 032 bp Feature: domain Description: Spr Location: 61068-61440 bp Feature: domain Description: Spr Location: 61 068-61 440 bp Feature: gene Location: 61470-63179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61656-62361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 656-62361 bp Feature: domain Description: HNHc Note: nucleases Location: 62925-63057 bp Feature: domain Description: HNHc Note: nucleases Location: 62925-63057 bp Feature: gene Location: 64023-64661 bp Feature: domain Description: CwlT_like Location: 64398-64644 bp Feature: domain Description: CwlT_like Location: 64398-64644 bp Feature: gene Location: 64689-67067 bp Feature: gene Location: 67099-67581 bp Feature: gene Location: 67583-67735 bp Feature: gene Location: 67853-69661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68117-68942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681 1 7-68942 bp Feature: domain Description: Intron_maturas2 Location: 69041-69332 bp Feature: domain Description: Intron_maturas2 Location: 69041 -69332 bp Feature: domain Description: HNHc Note: nucleases Location: 69488-69635 bp Feature: domain Description: HNHc Note: nucleases Location: 69488-69635 bp Feature: gene Location: 70228-72621 bp Feature: domain Description: VirB4_CagE Location: 70255-71359 bp Feature: domain Description: VirB4_CagE Location: 70255-71 359 bp Feature: domain Description: AAA_10 Location: 71569-72595 bp Feature: domain Description: AAA_1 0 Location: 71 569-72595 bp Feature: gene Location: 72681-73085 bp Feature: domain Description: TcpE Location: 72717-72993 bp Feature: domain Description: TcpE Location: 7271 7-72993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, Spr (COG0791), RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), VirB4_CagE (TIGR00929), AAA_10 (pfam12846), TcpE (pfam12648)

Seq: NUBC01000025.1 Bacillus toyonensis strain AFS025179 AFS025179_55_H4_Contig25_140312, whole genome shotgun sequence (101112 bp)
Overview 1 RT 1: 24986-28781 bp Neighborhood of RT #1 [24986, 28781] Phage_int_SAM_5 Phage_integrase RVT-UG17 SLATT_5 Feature: gene Location: 24986-25246 bp Feature: domain Description: Phage_int_SAM_5 Location: 24992-25241 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 4992 -2 52 41 bp Feature: gene Location: 25292-25630 bp Feature: domain Description: Phage_integrase Location: 25301-25619 bp Feature: domain Description: Phage_integrase Location: 2 5301-2 5619 bp Feature: gene Location: 25878-27245 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 26106-26685 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 6106-2 6685 bp Feature: gene Location: 27247-27894 bp Feature: domain Description: SLATT_5 Location: 27346-27874 bp Feature: domain Description: SLATT_5 Location: 2 7346-2 7874 bp Feature: gene Location: 28161-28781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), Phage_integrase (pfam00589), RVT-UG17, SLATT_5 (pfam18160)

Seq: NUBC01000047.1 Bacillus toyonensis strain AFS025179 AFS025179_55_H4_Contig47_140312, whole genome shotgun sequence (42684 bp)
Overview 1 RT 1: 21732-26566 bp Neighborhood of RT #1 [21732, 26566] RVT-GII GIIM DUF3854 Feature: gene Location: 21732-22745 bp Feature: gene Location: 23038-23226 bp Feature: gene Location: 23455-25332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23779-24475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 779-24475 bp Feature: domain Description: GIIM Note: maturase Location: 24559-24736 bp Feature: domain Description: GIIM Note: maturase Location: 24559-2473 6 bp Feature: gene Location: 25442-25804 bp Feature: domain Description: DUF3854 Location: 25535-25772 bp Feature: domain Description: DUF3 854 Location: 2553 5-25772 bp Feature: gene Location: 26336-26566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3854 (pfam12965)