myRT

myRT report for GCA_002557855.1_ASM255785v1

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Seq: NUAD01000038.1 Bacillus wiedmannii strain AFS028955 AFS028955_102_G7_Contig38_140514, whole genome shotgun sequence (43946 bp)
Overview 1 RT 1: 14311-20145 bp Neighborhood of RT #1 [14311, 20145] rpsA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 14311-14859 bp Feature: domain Description: rpsA Location: 14395-14803 bp Feature: domain Description: rpsA Location: 1 4395-1 4803 bp Feature: gene Location: 15596-15949 bp Feature: gene Location: 16088-17911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16355-17186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6355-1 71 86 bp Feature: domain Description: Intron_maturas2 Location: 17258-17576 bp Feature: domain Description: Intron_maturas2 Location: 1 7258-1 7576 bp Feature: domain Description: HNHc Note: nucleases Location: 17726-17882 bp Feature: domain Description: HNHc Note: nucleases Location: 1 7726-1 7882 bp Feature: gene Location: 18512-19657 bp Feature: gene Location: 19675-20145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUAD01000040.1 Bacillus wiedmannii strain AFS028955 AFS028955_102_G7_Contig40_140514, whole genome shotgun sequence (19777 bp)
Overview 1 RT 1: 8530-13636 bp Neighborhood of RT #1 [8530, 13659] Spr RVT-GII HNHc Phage_holin_5_2 XhlA Feature: gene Location: 8530-8691 bp Feature: gene Location: 8722-10062 bp Feature: domain Description: Spr Location: 9703-10045 bp Feature: domain Description: Spr Location: 9703-10045 bp Feature: gene Location: 10438-12237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10735-11428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10735-1142 8 bp Feature: domain Description: HNHc Note: nucleases Location: 11986-12124 bp Feature: domain Description: HNHc Note: nucleases Location: 11986-12 12 4 bp Feature: gene Location: 13184-13423 bp Feature: domain Description: Phage_holin_5_2 Location: 13235-13379 bp Feature: domain Description: Phage_holin_5_2 Location: 132 35-13379 bp Feature: gene Location: 13423-13659 bp Feature: domain Description: XhlA Location: 13441-13636 bp Feature: domain Description: XhlA Location: 13441-13636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Phage_holin_5_2 (pfam16079), XhlA (pfam10779), Spr (COG0791)