myRT

myRT report for GCA_002558155.1_ASM255815v1

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Seq: NTVK01000012.1 Bacillus megaterium strain AFS013177 AFS013177_93_C4_Contig12_140618, whole genome shotgun sequence (57832 bp)
Overview 1 RT 1: 2909-12251 bp 2 RT 2: 50718-56474 bp Neighborhood of RT #1 [2909, 12328] KAP_NTPase RVT-UG19 TIR_2 RMtype1_S_TRD-CR_like HsdM Neighborhood of RT #2 [50718, 56557] RVT-GII Intron_maturas2 HNHc Peptidase_M78 DUF3991 Toprim_2 Feature: gene Location: 2909-5962 bp Feature: domain Description: KAP_NTPase Location: 3554-4241 bp Feature: domain Description: KAP_NTPase Location: 3554-4241 bp Feature: gene Location: 6080-6622 bp Feature: gene Location: 6650-9733 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 7034-7505 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 7034-7505 bp Feature: domain Description: TIR_2 Location: 8942-9266 bp Feature: domain Description: TIR_2 Location: 8942-9266 bp Feature: gene Location: 10147-10713 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 10153-10681 bp Feature: domain Description: RMtype1 _S_TRD-CR_like Location: 1 01 53-1 0681 bp Feature: gene Location: 10736-12328 bp Feature: domain Description: HsdM Location: 10745-12251 bp Feature: domain Description: HsdM Location: 1 0745-1 2251 bp Feature: gene Location: 50718-51167 bp Feature: gene Location: 51385-51603 bp Feature: gene Location: 51760-53577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52024-52855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52024-52855 bp Feature: domain Description: Intron_maturas2 Location: 52930-53260 bp Feature: domain Description: Intron_maturas2 Location: 52930-53260 bp Feature: domain Description: HNHc Note: nucleases Location: 53395-53548 bp Feature: domain Description: HNHc Note: nucleases Location: 53395-53548 bp Feature: gene Location: 53771-55480 bp Feature: domain Description: Peptidase_M78 Location: 53786-54011 bp Feature: domain Description: Peptidase_M78 Location: 53786-5401 1 bp Feature: gene Location: 55568-56557 bp Feature: domain Description: DUF3991 Location: 55943-56132 bp Feature: domain Description: DUF3991 Location: 55943-561 32 bp Feature: domain Description: Toprim_2 Location: 56198-56474 bp Feature: domain Description: Toprim_2 Location: 561 98-56474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KAP_NTPase (pfam07693), RVT-UG19, TIR_2 (pfam13676), RMtype1_S_TRD-CR_like (cl38903), HsdM (COG0286), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Peptidase_M78 (pfam06114), DUF3991 (pfam13154)
Toprim_2 (pfam13155)

Seq: NTVK01000038.1 Bacillus megaterium strain AFS013177 AFS013177_93_C4_Contig38_140618, whole genome shotgun sequence (12720 bp)
Overview 1 RT 1: 2489-7891 bp Neighborhood of RT #1 [2489, 7896] Spore_permease RVT_N RVT-GII GIIM EstA EstA Feature: gene Location: 2489-3589 bp Feature: domain Description: Spore_permease Location: 2504-3464 bp Feature: domain Description: Spore_permease Location: 2 504-3464 bp Feature: gene Location: 3772-3972 bp Feature: gene Location: 5006-6691 bp Feature: domain Description: RVT_N Location: 5090-5336 bp Feature: domain Description: RVT_N Location: 5090-5336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5390-6050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5390-6050 bp Feature: domain Description: GIIM Note: maturase Location: 6119-6350 bp Feature: domain Description: GIIM Note: maturase Location: 6119-6350 bp Feature: gene Location: 6880-7137 bp Feature: gene Location: 7264-7896 bp Feature: domain Description: EstA Location: 7291-7681 bp Feature: domain Description: EstA Location: 72 91-7681 bp Feature: domain Description: EstA Location: 7699-7891 bp Feature: domain Description: EstA Location: 7699-7891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spore_permease (pfam03845), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), EstA (COG1075)