myRT

myRT report for GCA_002558335.1_ASM255833v1

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Seq: NTXO01000048.1 Bacillus thuringiensis strain AFS007186 AFS007186_96_D2_Contig48_140514, whole genome shotgun sequence (39664 bp)
Overview 1 RT 1: 21763-27247 bp Neighborhood of RT #1 [21763, 27247] CwlT_like RVT-GII HNHc CwlT_like NlpD Spr Feature: gene Location: 21763-22917 bp Feature: domain Description: CwlT_like Location: 22615-22900 bp Feature: domain Description: CwlT_like Location: 2261 5-22900 bp Feature: gene Location: 23160-23378 bp Feature: gene Location: 23690-25486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23948-24653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23948-24653 bp Feature: domain Description: HNHc Note: nucleases Location: 25214-25349 bp Feature: domain Description: HNHc Note: nucleases Location: 2521 4-25349 bp Feature: gene Location: 25552-26655 bp Feature: domain Description: CwlT_like Location: 25582-25768 bp Feature: domain Description: CwlT_like Location: 25582-25768 bp Feature: domain Description: NlpD Location: 25789-26224 bp Feature: domain Description: NlpD Location: 25789-26224 bp Feature: domain Description: Spr Location: 26263-26596 bp Feature: domain Description: Spr Location: 26263-26596 bp Feature: gene Location: 26672-27247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: NTXO01000066.1 Bacillus thuringiensis strain AFS007186 AFS007186_96_D2_Contig66_140514, whole genome shotgun sequence (52608 bp)
Overview 1 RT 1: 6688-11310 bp 2 RT 2: 27065-35942 bp Neighborhood of RT #1 [6688, 11771] RVT-GII Bacillus_HBL Neighborhood of RT #2 [27065, 35942] rpsA RVT-GII TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 6688-7188 bp Feature: gene Location: 7296-7820 bp Feature: gene Location: 7829-9109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8150-8885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8150-8885 bp Feature: gene Location: 9106-9360 bp Feature: gene Location: 10638-11771 bp Feature: domain Description: Bacillus_HBL Location: 10782-11310 bp Feature: domain Description: Bacillus_HBL Location: 10782 -11310 bp Feature: gene Location: 27065-27997 bp Feature: gene Location: 28001-29014 bp Feature: domain Description: rpsA Location: 28298-28835 bp Feature: domain Description: rpsA Location: 2 82 98-2 8835 bp Feature: gene Location: 29069-31090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29390-30125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9390-3012 5 bp Feature: gene Location: 32107-35535 bp Feature: domain Description: TraG-D_C Location: 33724-34084 bp Feature: domain Description: TraG-D_C Location: 3372 4-34084 bp Feature: domain Description: Ftsk_gamma Location: 34519-34690 bp Feature: domain Description: Ftsk_gamma Location: 34519-34690 bp Feature: domain Description: Ftsk_gamma Location: 34858-34996 bp Feature: domain Description: Ftsk_gamma Location: 34858-34996 bp Feature: gene Location: 35553-35942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Bacillus_HBL (pfam05791), rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: NTXO01000071.1 Bacillus thuringiensis strain AFS007186 AFS007186_96_D2_Contig71_140514, whole genome shotgun sequence (28481 bp)
Overview 1 RT 1: 10836-16751 bp Neighborhood of RT #1 [10836, 16751] RVT-Retrons guaA Feature: gene Location: 10836-11300 bp Feature: gene Location: 11455-12033 bp Feature: gene Location: 12341-14089 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12464-13055 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12464-13 055 bp Feature: gene Location: 14646-16193 bp Feature: domain Description: guaA Location: 14667-16191 bp Feature: domain Description: guaA Location: 14667-16191 bp Feature: gene Location: 16479-16751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, guaA (PRK00074)