myRT

myRT report for GCA_002558385.1_ASM255838v1

Download annotations/find similar RTs

Seq: NTXT01000052.1 Bacillus thuringiensis strain AFS006689 AFS006689_102_A7_Contig52_140514, whole genome shotgun sequence (35587 bp)
Overview 1 RT 1: 6916-12795 bp Neighborhood of RT #1 [6916, 12795] TraC-F-type Lysozyme_like RVT-GII Intron_maturas2 HNHc Spr Feature: gene Location: 6916-8853 bp Feature: domain Description: TraC-F-type Location: 7633-8758 bp Feature: domain Description: TraC-F-type Location: 7633-8758 bp Feature: gene Location: 8858-9520 bp Feature: domain Description: Lysozyme_like Location: 9047-9509 bp Feature: domain Description: Lysozyme_like Location: 9047-9509 bp Feature: gene Location: 10091-11914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10355-11186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0355-1 1 1 86 bp Feature: domain Description: Intron_maturas2 Location: 11261-11564 bp Feature: domain Description: Intron_maturas2 Location: 1 1 261 -1 1 564 bp Feature: domain Description: HNHc Note: nucleases Location: 11735-11888 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 735-1 1 888 bp Feature: gene Location: 12026-12502 bp Feature: domain Description: Spr Location: 12104-12479 bp Feature: domain Description: Spr Location: 1 21 04-1 2479 bp Feature: gene Location: 12523-12795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Spr (COG0791), TraC-F-type (TIGR02746), Lysozyme_like (pfam13702)

Seq: NTXT01000057.1 Bacillus thuringiensis strain AFS006689 AFS006689_102_A7_Contig57_140514, whole genome shotgun sequence (76509 bp)
Overview 1 RT 1: 41118-45834 bp Neighborhood of RT #1 [41118, 46496] Peptidase_M78 DZR DZR DZR Phage_int_SAM_3 INT_ICEBs1_C_like RVT-Retrons COG4637 COG4637 TOPRIM_OLD Feature: gene Location: 41118-41945 bp Feature: domain Description: Peptidase_M78 Location: 41121-41349 bp Feature: domain Description: Peptidase_M78 Location: 4112 1-41349 bp Feature: domain Description: DZR Location: 41442-41511 bp Feature: domain Description: DZR Location: 41442 -41511 bp Feature: domain Description: DZR Location: 41574-41661 bp Feature: domain Description: DZR Location: 41574-41661 bp Feature: domain Description: DZR Location: 41727-41781 bp Feature: domain Description: DZR Location: 4172 7-41781 bp Feature: gene Location: 41959-43134 bp Feature: domain Description: Phage_int_SAM_3 Location: 42151-42313 bp Feature: domain Description: Phage_int_SAM_3 Location: 42 151-42 313 bp Feature: domain Description: INT_ICEBs1_C_like Location: 42508-43054 bp Feature: domain Description: INT_ICEBs1_C_like Location: 42 508-43054 bp Feature: gene Location: 43263-44264 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43383-43935 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43383-43935 bp Feature: gene Location: 44281-44421 bp Feature: gene Location: 44505-46496 bp Feature: domain Description: COG4637 Location: 44508-44634 bp Feature: domain Description: COG4637 Location: 44508-44634 bp Feature: domain Description: COG4637 Location: 45069-45462 bp Feature: domain Description: COG4637 Location: 45069-45462 bp Feature: domain Description: TOPRIM_OLD Location: 45594-45834 bp Feature: domain Description: TOPRIM_OLD Location: 45594-45834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M78 (pfam06114), DZR (pfam12773), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-Retrons, COG4637 (Predicted ATPase ), TOPRIM_OLD (cd01026)

Seq: NTXT01000092.1 Bacillus thuringiensis strain AFS006689 AFS006689_102_A7_Contig92_140514, whole genome shotgun sequence (68568 bp)
Overview 1 RT 1: 55440-61161 bp Neighborhood of RT #1 [55440, 61161] RVT-GII Feature: gene Location: 55440-58916 bp Feature: gene Location: 59288-59899 bp Feature: gene Location: 60032-60208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60104-60191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60104-60191 bp Feature: gene Location: 60338-60472 bp Feature: gene Location: 60949-61161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII