myRT

myRT report for GCA_002558645.1_ASM255864v1

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Seq: NTYN01000013.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig12_140514, whole genome shotgun sequence (55688 bp)
Overview 1 RT 1: 24380-31609 bp Neighborhood of RT #1 [24380, 31609] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 24380-24607 bp Feature: gene Location: 24679-25587 bp Feature: gene Location: 26334-28199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26634-27339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26634-27339 bp Feature: domain Description: GIIM Note: maturase Location: 27426-27609 bp Feature: domain Description: GIIM Note: maturase Location: 27426-27609 bp Feature: gene Location: 28474-30879 bp Feature: domain Description: KOG1000 Location: 29185-29401 bp Feature: domain Description: KOG1 000 Location: 291 85-29401 bp Feature: domain Description: KOG1000 Location: 30004-30337 bp Feature: domain Description: KOG1 000 Location: 30004-30337 bp Feature: gene Location: 30896-31609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: NTYN01000131.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig131_140514, whole genome shotgun sequence (5179 bp)
Overview 1 RT 1: 613-4948 bp Neighborhood of RT #1 [613, 5073] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 613-2436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: Intron_maturas2 Location: 1783-2 101 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 54-2 407 bp Feature: gene Location: 3283-5073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3580-4276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3580-42 76 bp Feature: domain Description: HNHc Note: nucleases Location: 4816-4948 bp Feature: domain Description: HNHc Note: nucleases Location: 4816-4948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NTYN01000171.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig171_140514, whole genome shotgun sequence (1890 bp)
Overview 1 RT 1: 64-1724 bp Neighborhood of RT #1 [64, 1724] RVT-GII GIIM Feature: gene Location: 64-1395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 73 -1012 bp Feature: domain Description: GIIM Note: maturase Location: 1087-1312 bp Feature: domain Description: GIIM Note: maturase Location: 1087-13 12 bp Feature: gene Location: 1545-1724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NTYN01000182.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig182_140514, whole genome shotgun sequence (7525 bp)
Overview 1 RT 1: 3-7502 bp Neighborhood of RT #1 [3, 7522] AE_Prim_S_like RVT-UG10 PRK13922 Feature: gene Location: 3-521 bp Feature: gene Location: 531-956 bp Feature: gene Location: 1395-7034 bp Feature: domain Description: AE_Prim_S_like Location: 1605-1824 bp Feature: domain Description: AE_Prim_S_like Location: 1605-1824 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2811-3465 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2811-34 65 bp Feature: gene Location: 7310-7522 bp Feature: domain Description: PRK13922 Location: 7382-7502 bp Feature: domain Description: PRK13922 Location: 7382-7502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: NTYN01000190.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig190_140514, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 390-2190 bp Neighborhood of RT #1 [390, 2213] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 390-2213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65 4-1488 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: Intron_maturas2 Location: 15 5 7-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NTYN01000021.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig20_140514, whole genome shotgun sequence (2660 bp)
Overview 1 RT 1: 665-2352 bp Neighborhood of RT #1 [665, 2426] RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 665-1273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96 5-1259 bp Feature: gene Location: 1284-2426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1347-1557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1347-1557 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1839 bp Feature: domain Description: GIIM Note: maturase Location: 16 71-1839 bp Feature: domain Description: HNHc Note: nucleases Location: 2187-2352 bp Feature: domain Description: HNHc Note: nucleases Location: 2187-2352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NTYN01000027.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig26_140514, whole genome shotgun sequence (2705 bp)
Overview 1 RT 1: 159-2311 bp Neighborhood of RT #1 [159, 2311] RVT-GII HNHc Feature: gene Location: 159-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: domain Description: HNHc Note: nucleases Location: 17 49-1824 bp Feature: gene Location: 2129-2311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NTYN01000057.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig57_140514, whole genome shotgun sequence (2610 bp)
Overview 1 RT 1: 742-2395 bp Neighborhood of RT #1 [742, 2511] RVT-GII HNHc Feature: gene Location: 742-2511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000-1696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000-1696 bp Feature: domain Description: HNHc Note: nucleases Location: 2257-2395 bp Feature: domain Description: HNHc Note: nucleases Location: 2257-2395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NTYN01000099.1 Bacillus cereus strain AFS004414 AFS004414_101_F12_Contig99_140514, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 94-2420 bp Neighborhood of RT #1 [94, 2420] RVT-GII HNHc Feature: gene Location: 94-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: gene Location: 2202-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)