myRT

myRT report for GCA_002558665.1_ASM255866v1

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Seq: NTYP01000011.1 Bacillus cereus strain AFS003807 AFS003807_105_D9_Contig11_140523, whole genome shotgun sequence (13893 bp)
Overview 1 RT 1: 8913-13747 bp Neighborhood of RT #1 [8913, 13803] T_den_put_tspse RVT-GII HNHc RVT-GII PDDEXK_2 Rve Feature: gene Location: 8913-9365 bp Feature: gene Location: 9566-10195 bp Feature: domain Description: T_den_put_tspse Location: 9569-10181 bp Feature: domain Description: T_den_put_tspse Location: 9569-1 01 81 bp Feature: gene Location: 10394-11587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10397-10781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0397-1 0781 bp Feature: domain Description: HNHc Note: nucleases Location: 11339-11471 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 339-1 1 471 bp Feature: gene Location: 11619-11954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11880-11946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 880-1 1 946 bp Feature: gene Location: 12706-13029 bp Feature: domain Description: PDDEXK_2 Location: 12853-12991 bp Feature: domain Description: PDDEXK_2 Location: 1 2853-1 2991 bp Feature: gene Location: 13489-13803 bp Feature: domain Description: Rve Location: 13576-13747 bp Feature: domain Description: Rve Location: 1 3576-1 3747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT-GII, HNHc (smart00507), PDDEXK_2 (pfam12784), Rve (COG3316)

Seq: NTYP01000122.1 Bacillus cereus strain AFS003807 AFS003807_105_D9_Contig122_140523, whole genome shotgun sequence (476 bp)
Overview 1 RT 1: 60-474 bp Neighborhood of RT #1 [60, 473] RVT-GII Feature: gene Location: 60-473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NTYP01000146.1 Bacillus cereus strain AFS003807 AFS003807_105_D9_Contig146_140523, whole genome shotgun sequence (475 bp)
Overview 1 RT 1: 59-473 bp Neighborhood of RT #1 [59, 472] RVT-GII Feature: gene Location: 59-472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 68-473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NTYP01000069.1 Bacillus cereus strain AFS003807 AFS003807_105_D9_Contig69_140523, whole genome shotgun sequence (2588 bp)
Overview 1 RT 1: 144-1932 bp Neighborhood of RT #1 [144, 1961] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 144-1961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 14 -1236 bp Feature: domain Description: Intron_maturas2 Location: 1317-1611 bp Feature: domain Description: Intron_maturas2 Location: 1317-1611 bp Feature: domain Description: HNHc Note: nucleases Location: 1758-1932 bp Feature: domain Description: HNHc Note: nucleases Location: 1758-1932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NTYP01000072.1 Bacillus cereus strain AFS003807 AFS003807_105_D9_Contig72_140523, whole genome shotgun sequence (9603 bp)
Overview 1 RT 1: 4864-9583 bp Neighborhood of RT #1 [4864, 9600] CwlT_like NlpD Spr RVT-GII HNHc CwlT_like Feature: gene Location: 4864-5439 bp Feature: gene Location: 5456-6559 bp Feature: domain Description: CwlT_like Location: 5492-5678 bp Feature: domain Description: CwlT_like Location: 5 492-5 678 bp Feature: domain Description: NlpD Location: 5705-6128 bp Feature: domain Description: NlpD Location: 5 705 -6128 bp Feature: domain Description: Spr Location: 6164-6500 bp Feature: domain Description: Spr Location: 6164-65 00 bp Feature: gene Location: 6619-8415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6877-7582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6877-75 82 bp Feature: domain Description: HNHc Note: nucleases Location: 8146-8278 bp Feature: domain Description: HNHc Note: nucleases Location: 8146-8278 bp Feature: gene Location: 8727-8945 bp Feature: gene Location: 9187-9600 bp Feature: domain Description: CwlT_like Location: 9298-9583 bp Feature: domain Description: CwlT_like Location: 9298-95 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, NlpD (COG0739), Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: NTYP01000077.1 Bacillus cereus strain AFS003807 AFS003807_105_D9_Contig77_140523, whole genome shotgun sequence (1543 bp)
Overview 1 RT 1: 16-1458 bp Neighborhood of RT #1 [16, 1541] RVT-GII GIIM Feature: gene Location: 16-279 bp Feature: gene Location: 546-1541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 549-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 549-1158 bp Feature: domain Description: GIIM Note: maturase Location: 1233-1458 bp Feature: domain Description: GIIM Note: maturase Location: 1233-1458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)