myRT

myRT report for GCA_002558815.1_ASM255881v1

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Seq: NTYX01000045.1 Bacillus thuringiensis strain AFS002920 AFS002920_100_G12_Contig45_140514, whole genome shotgun sequence (68923 bp)
Overview 1 RT 1: 34137-39937 bp Neighborhood of RT #1 [34137, 41580] TPR RVT-Retrons YbjD YbjD ABC_RecN Feature: gene Location: 34137-34559 bp Feature: domain Description: TPR Location: 34185-34485 bp Feature: domain Description: TPR Location: 341 85-34485 bp Feature: gene Location: 34789-34920 bp Feature: gene Location: 35231-36220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35315-35879 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3531 5-35879 bp Feature: gene Location: 36467-38434 bp Feature: domain Description: YbjD Location: 36470-36755 bp Feature: domain Description: YbjD Location: 36470-36755 bp Feature: domain Description: YbjD Location: 36977-37604 bp Feature: domain Description: YbjD Location: 36977-37604 bp Feature: gene Location: 39742-41580 bp Feature: domain Description: ABC_RecN Location: 39802-39937 bp Feature: domain Description: ABC_RecN Location: 39802-39937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT-Retrons, YbjD (COG3593), ABC_RecN (cd03241)

Seq: NTYX01000061.1 Bacillus thuringiensis strain AFS002920 AFS002920_100_G12_Contig61_140514, whole genome shotgun sequence (140911 bp)
Overview 1 RT 1: 23184-29272 bp Neighborhood of RT #1 [23184, 29277] PRK13922 PRK13927 RVT-GII HNHc PRK00024 PRK00148 Feature: gene Location: 23184-24035 bp Feature: domain Description: PRK13922 Location: 23187-24015 bp Feature: domain Description: PRK1392 2 Location: 2 3187-2 4015 bp Feature: gene Location: 24077-25096 bp Feature: domain Description: PRK13927 Location: 24095-25085 bp Feature: domain Description: PRK1392 7 Location: 2 4095-2 5085 bp Feature: gene Location: 25418-27292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25739-26450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5739-2 6450 bp Feature: domain Description: HNHc Note: nucleases Location: 27044-27212 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7044-2 72 12 bp Feature: gene Location: 27993-28634 bp Feature: domain Description: PRK00024 Location: 28005-28620 bp Feature: domain Description: PRK0002 4 Location: 2 8005-2 862 0 bp Feature: gene Location: 28681-29277 bp Feature: domain Description: PRK00148 Location: 28711-29272 bp Feature: domain Description: PRK00148 Location: 2 8711-2 92 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), PRK00024 (DNA repair protein RadC), PRK00148 (Maf-like protein; Reviewed)