myRT

myRT report for GCA_002559055.1_ASM255905v1

Download annotations/find similar RTs

Seq: NTZL01000043.1 Bacillus cereus strain AFS001977 AFS001977_105_C9_Contig43_140523, whole genome shotgun sequence (50138 bp)
Overview 1 RT 1: 22379-29586 bp Neighborhood of RT #1 [22379, 29642] AbiJ_NTD4 COG4637 YbjD RVT-Retrons INT_ICEBs1_C_like Feature: gene Location: 22379-23218 bp Feature: domain Description: AbiJ_NTD4 Location: 22385-22820 bp Feature: domain Description: AbiJ_NTD4 Location: 22385-22820 bp Feature: gene Location: 24082-26025 bp Feature: domain Description: COG4637 Location: 24100-24256 bp Feature: domain Description: COG4637 Location: 241 00-24256 bp Feature: domain Description: YbjD Location: 24769-25459 bp Feature: domain Description: YbjD Location: 24769-25459 bp Feature: gene Location: 26300-27259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26351-26906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26351 -26906 bp Feature: gene Location: 28209-29066 bp Feature: gene Location: 29301-29642 bp Feature: domain Description: INT_ICEBs1_C_like Location: 29307-29586 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 29307-29586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiJ_NTD4 (pfam18863), COG4637 (Predicted ATPase ), YbjD (COG3593), RVT-Retrons, INT_ICEBs1_C_like (cd01189)

Seq: NTZL01000076.1 Bacillus cereus strain AFS001977 AFS001977_105_C9_Contig76_140523, whole genome shotgun sequence (18302 bp)
Overview 1 RT 1: 2395-7293 bp Neighborhood of RT #1 [2395, 7334] DDE_Tnp_1 DDE_Tnp_1 RVT-GII GIIM MFS_NepI_like Feature: gene Location: 2395-3102 bp Feature: domain Description: DDE_Tnp_1 Location: 2752-3088 bp Feature: domain Description: DDE_Tnp_1 Location: 2 752 -3088 bp Feature: gene Location: 3151-3453 bp Feature: domain Description: DDE_Tnp_1 Location: 3268-3439 bp Feature: domain Description: DDE_Tnp_1 Location: 32 68-3439 bp Feature: gene Location: 3715-5046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4024-4663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402 4-4663 bp Feature: domain Description: GIIM Note: maturase Location: 4738-4963 bp Feature: domain Description: GIIM Note: maturase Location: 4738-4963 bp Feature: gene Location: 5313-5576 bp Feature: gene Location: 6087-7334 bp Feature: domain Description: MFS_NepI_like Location: 6183-7293 bp Feature: domain Description: MFS_NepI_like Location: 6183-72 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), MFS_NepI_like (cd17324)