myRT

myRT report for GCA_002559405.1_ASM255940v1

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Seq: NTZO01000205.1 Bacillus sp. AFS001701 AFS001701_84_G11_Contig162_140604, whole genome shotgun sequence (9777 bp)
Overview 1 RT 1: 2047-7215 bp Neighborhood of RT #1 [2047, 7277] RVT-GII HTH_LacI PBP1_TreR_like PTS-II-BC-sucr Feature: gene Location: 2047-2337 bp Feature: gene Location: 2511-2696 bp Feature: gene Location: 3985-4266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4213-4258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 3-4258 bp Feature: gene Location: 4684-5691 bp Feature: domain Description: HTH_LacI Location: 4714-4858 bp Feature: domain Description: HTH_LacI Location: 471 4-4858 bp Feature: domain Description: PBP1_TreR_like Location: 4876-5650 bp Feature: domain Description: PBP1 _TreR_like Location: 4876-5650 bp Feature: gene Location: 5820-7277 bp Feature: domain Description: PTS-II-BC-sucr Location: 5829-7215 bp Feature: domain Description: PTS-II-BC-sucr Location: 5829-721 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_LacI (cd01392), PBP1_TreR_like, PTS-II-BC-sucr (TIGR01996)

Seq: NTZO01000154.1 Bacillus sp. AFS001701 AFS001701_84_G11_Contig196_140604, whole genome shotgun sequence (7043 bp)
Overview 1 RT 1: 414-4352 bp Neighborhood of RT #1 [414, 4441] PyrE RVT-GII HAD-like Feature: gene Location: 414-752 bp Feature: gene Location: 934-1278 bp Feature: domain Description: PyrE Location: 955-1273 bp Feature: domain Description: PyrE Location: 955-12 73 bp Feature: gene Location: 1357-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1612-1729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1612 -172 9 bp Feature: gene Location: 2633-3217 bp Feature: gene Location: 3692-4441 bp Feature: domain Description: HAD-like Location: 3713-4352 bp Feature: domain Description: HAD-like Location: 3713-4352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PyrE (COG0461), RVT-GII, HAD-like (cd07515)

Seq: NTZO01000071.1 Bacillus sp. AFS001701 AFS001701_84_G11_Contig25_140604, whole genome shotgun sequence (18403 bp)
Overview 1 RT 1: 182-6767 bp Neighborhood of RT #1 [182, 6767] PQQ_3 PQQ_3 PQQ_3 PQQ_3 Big_6 PPC PPC PPC RVT-GII GIIM Feature: gene Location: 182-3385 bp Feature: domain Description: PQQ_3 Location: 581-692 bp Feature: domain Description: PQQ_3 Location: 581-692 bp Feature: domain Description: PQQ_3 Location: 749-842 bp Feature: domain Description: PQQ_3 Location: 749-842 bp Feature: domain Description: PQQ_3 Location: 848-968 bp Feature: domain Description: PQQ_3 Location: 848-968 bp Feature: domain Description: PQQ_3 Location: 971-1094 bp Feature: domain Description: PQQ_3 Location: 971-1094 bp Feature: domain Description: Big_6 Location: 1814-2042 bp Feature: domain Description: Big_6 Location: 1814-2042 bp Feature: domain Description: PPC Location: 2150-2351 bp Feature: domain Description: PPC Location: 2150-23 51 bp Feature: domain Description: PPC Location: 2507-2711 bp Feature: domain Description: PPC Location: 2507-2711 bp Feature: domain Description: PPC Location: 2867-3071 bp Feature: domain Description: PPC Location: 2867-3 071 bp Feature: gene Location: 3752-3901 bp Feature: gene Location: 4111-5412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4417-5047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4417-5047 bp Feature: domain Description: GIIM Note: maturase Location: 5128-5365 bp Feature: domain Description: GIIM Note: maturase Location: 5128-53 65 bp Feature: gene Location: 5626-6051 bp Feature: gene Location: 6210-6767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PQQ_3 (pfam13570), Big_6 (pfam17936), PPC (pfam04151), RVT-GII, GIIM (pfam08388)

Seq: NTZO01000082.1 Bacillus sp. AFS001701 AFS001701_84_G11_Contig36_140604, whole genome shotgun sequence (10180 bp)
Overview 1 RT 1: 1-4478 bp Neighborhood of RT #1 [1, 4501] RVT-GII GIIM DUF3841 GerA Feature: gene Location: 1-129 bp Feature: gene Location: 786-2105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041-1731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 1-1731 bp Feature: domain Description: GIIM Note: maturase Location: 1803-2007 bp Feature: domain Description: GIIM Note: maturase Location: 1803-2007 bp Feature: gene Location: 2360-2926 bp Feature: domain Description: DUF3841 Location: 2369-2750 bp Feature: domain Description: DUF384 1 Location: 2369-2750 bp Feature: gene Location: 3185-4501 bp Feature: domain Description: GerA Location: 3209-4478 bp Feature: domain Description: GerA Location: 3209-4 4 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3841 (pfam12952), GerA (pfam03323)

Seq: NTZO01000557.1 Bacillus sp. AFS001701 AFS001701_84_G11_Contig382_140604, whole genome shotgun sequence (8944 bp)
Overview 1 RT 1: 1-8395 bp Neighborhood of RT #1 [1, 8490] SpoVR RVT-GII HNHc Inhibitor_I9 Peptidases_S8_subtilisin_Vpr-like fn3_5 Dockerin_II Feature: gene Location: 1-435 bp Feature: domain Description: SpoVR Location: 10-412 bp Feature: domain Description: SpoVR Location: 10-412 bp Feature: gene Location: 1325-3088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1583-2279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 83-2279 bp Feature: domain Description: HNHc Note: nucleases Location: 2825-2951 bp Feature: domain Description: HNHc Note: nucleases Location: 2825 -295 1 bp Feature: gene Location: 3388-3561 bp Feature: gene Location: 4297-8490 bp Feature: domain Description: Inhibitor_I9 Location: 4558-4849 bp Feature: domain Description: Inhibitor_I9 Location: 45 5 8-4849 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 4963-6298 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 4963-6298 bp Feature: domain Description: fn3_5 Location: 6439-6706 bp Feature: domain Description: fn3_5 Location: 6439-6706 bp Feature: domain Description: Dockerin_II Location: 8251-8395 bp Feature: domain Description: Dockerin_II Location: 825 1-8395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVR (pfam04293), RVT-GII, HNHc (smart00507), Inhibitor_I9 (pfam05922), Peptidases_S8_subtilisin_Vpr-like (cd07474), fn3_5 (pfam06280), Dockerin_II (cd14254)

Seq: NTZO01000612.1 Bacillus sp. AFS001701 AFS001701_84_G11_Contig571_140604, whole genome shotgun sequence (1607 bp)
Overview 1 RT 1: 3-1604 bp Neighborhood of RT #1 [3, 1604] RVT-GII RVT-GII GIIM Feature: gene Location: 3-491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201-486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201-486 bp Feature: gene Location: 524-1252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 527-884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 527-884 bp Feature: domain Description: GIIM Note: maturase Location: 971-1178 bp Feature: domain Description: GIIM Note: maturase Location: 971-1178 bp Feature: gene Location: 1284-1604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)