myRT

myRT report for GCA_002560095.1_ASM256009v1

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Seq: NTQQ01000021.1 Bacillus cereus strain AFS025485 AFS025485_73_E1_Contig21_140411, whole genome shotgun sequence (20436 bp)
Overview 1 RT 1: 4646-10113 bp Neighborhood of RT #1 [4646, 10130] CwlT_like NlpD Spr RVT-GII HNHc CwlT_like Feature: gene Location: 4646-5221 bp Feature: gene Location: 5238-6341 bp Feature: domain Description: CwlT_like Location: 5268-5454 bp Feature: domain Description: CwlT_like Location: 5268-5454 bp Feature: domain Description: NlpD Location: 5481-5913 bp Feature: domain Description: NlpD Location: 5481 -591 3 bp Feature: domain Description: Spr Location: 5949-6282 bp Feature: domain Description: Spr Location: 5949-6282 bp Feature: gene Location: 6407-8203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6665-7370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6665-7370 bp Feature: domain Description: HNHc Note: nucleases Location: 7931-8066 bp Feature: domain Description: HNHc Note: nucleases Location: 7931 -8066 bp Feature: gene Location: 8515-8733 bp Feature: gene Location: 8976-10130 bp Feature: domain Description: CwlT_like Location: 9828-10113 bp Feature: domain Description: CwlT_like Location: 9828-1 01 1 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, NlpD (COG0739), Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: NTQQ01000234.1 Bacillus cereus strain AFS025485 AFS025485_73_E1_Contig234_140411, whole genome shotgun sequence (16544 bp)
Overview 1 RT 1: 1710-9159 bp Neighborhood of RT #1 [1710, 9338] RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 1710-2183 bp Feature: gene Location: 2201-3712 bp Feature: gene Location: 4304-6121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4574-5396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4574-5396 bp Feature: domain Description: Intron_maturas2 Location: 5477-5771 bp Feature: domain Description: Intron_maturas2 Location: 5477-5771 bp Feature: domain Description: HNHc Note: nucleases Location: 5918-6092 bp Feature: domain Description: HNHc Note: nucleases Location: 5918-6092 bp Feature: gene Location: 6315-8096 bp Feature: domain Description: TraG-D_C Location: 6366-6726 bp Feature: domain Description: TraG-D_C Location: 6366-672 6 bp Feature: domain Description: Ftsk_gamma Location: 7086-7266 bp Feature: domain Description: Ftsk_gamma Location: 7086-72 66 bp Feature: domain Description: Ftsk_gamma Location: 7419-7593 bp Feature: domain Description: Ftsk_gamma Location: 7419-7593 bp Feature: gene Location: 8355-9338 bp Feature: domain Description: rpsA Location: 8622-9159 bp Feature: domain Description: rpsA Location: 862 2 -9159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NTQQ01000281.1 Bacillus cereus strain AFS025485 AFS025485_73_E1_Contig281_140411, whole genome shotgun sequence (1973 bp)
Overview 1 RT 1: 167-1744 bp Neighborhood of RT #1 [167, 1827] RVT-GII GIIM Feature: gene Location: 167-346 bp Feature: gene Location: 496-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)