myRT

myRT report for GCA_002560605.1_ASM256060v1

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Seq: NTRP01000062.1 Bacillus thuringiensis strain AFS023096 AFS023096_73_E6_Contig62_140411, whole genome shotgun sequence (18616 bp)
Overview 1 RT 1: 628-4267 bp 2 RT 2: 11170-14417 bp Neighborhood of RT #1 [628, 4299] RVT-GII Intron_maturas2 HNHc PRK13922 HTH_21 Neighborhood of RT #2 [11170, 14425] PRK06760 RVT-GII DDE_Tnp_1 Feature: gene Location: 628-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1 720 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: Intron_maturas2 Location: 1 801 -2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2416 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-241 6 bp Feature: gene Location: 2731-3495 bp Feature: domain Description: PRK13922 Location: 2827-3490 bp Feature: domain Description: PRK1 3922 Location: 2827-3490 bp Feature: gene Location: 4111-4299 bp Feature: domain Description: HTH_21 Location: 4174-4267 bp Feature: domain Description: HTH_21 Location: 41 74-4267 bp Feature: gene Location: 11170-11874 bp Feature: domain Description: PRK06760 Location: 11176-11854 bp Feature: domain Description: PRK06760 Location: 1 1 1 76-1 1 854 bp Feature: gene Location: 11891-12055 bp Feature: gene Location: 12968-13390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12971-13316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2971 -1 331 6 bp Feature: gene Location: 13894-14151 bp Feature: gene Location: 14210-14425 bp Feature: domain Description: DDE_Tnp_1 Location: 14234-14417 bp Feature: domain Description: DDE_Tnp_1 Location: 1 4234-1 441 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13922 (rod shape-determining protein MreC; Provisional), HTH_21 (pfam13276), PRK06760 (hypothetical protein; Provisional), DDE_Tnp_1 (pfam01609)

Seq: NTRP01000064.1 Bacillus thuringiensis strain AFS023096 AFS023096_73_E6_Contig64_140411, whole genome shotgun sequence (26876 bp)
Overview 1 RT 1: 1909-8759 bp Neighborhood of RT #1 [1909, 8759] DEXDc RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1909-2136 bp Feature: gene Location: 2160-4793 bp Feature: domain Description: DEXDc Location: 2988-3939 bp Feature: domain Description: DEXDc Location: 2 988-3939 bp Feature: gene Location: 5397-7205 bp Feature: domain Description: RVT_N Location: 5448-5688 bp Feature: domain Description: RVT_N Location: 5448-5688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5748-6402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5748-6402 bp Feature: domain Description: GIIM Note: maturase Location: 6465-6699 bp Feature: domain Description: GIIM Note: maturase Location: 6465-6699 bp Feature: domain Description: HNHc Note: nucleases Location: 6912-7059 bp Feature: domain Description: HNHc Note: nucleases Location: 6912 -7059 bp Feature: gene Location: 7322-8029 bp Feature: gene Location: 8046-8759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NTRP01000007.1 Bacillus thuringiensis strain AFS023096 AFS023096_73_E6_Contig7_140411, whole genome shotgun sequence (158706 bp)
Overview 1 RT 1: 50205-53930 bp Neighborhood of RT #1 [50205, 53930] RVT-GII RVT-GII Peptidases_S8_Subtilisin_subset Feature: gene Location: 50205-50474 bp Feature: gene Location: 50496-50648 bp Feature: gene Location: 50784-51050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50802-51021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50802-51021 bp Feature: gene Location: 51125-51610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51131-51431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5113 1-5143 1 bp Feature: gene Location: 52158-53129 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 52377-53025 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 523 77-53 025 bp Feature: gene Location: 53145-53930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Peptidases_S8_Subtilisin_subset (cd07477)