myRT

myRT report for GCA_002560645.1_ASM256064v1

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Seq: NTRS01000013.1 Bacillus thuringiensis strain AFS022658 AFS022658_100_B12_Contig13_140514, whole genome shotgun sequence (140749 bp)
Overview 1 RT 1: 111494-117546 bp Neighborhood of RT #1 [111494, 117566] PRK00148 PRK00024 RVT-GII HNHc PRK13927 PRK13922 Feature: gene Location: 111494-112069 bp Feature: domain Description: PRK00148 Location: 111503-112064 bp Feature: domain Description: PRK001 48 Location: 1 1 1 503-1 1 2064 bp Feature: gene Location: 112116-112757 bp Feature: domain Description: PRK00024 Location: 112128-112743 bp Feature: domain Description: PRK00024 Location: 1 1 21 28-1 1 2743 bp Feature: gene Location: 113458-115332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113779-114490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3779-1 1 4490 bp Feature: domain Description: HNHc Note: nucleases Location: 115084-115252 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 5084-1 1 5252 bp Feature: gene Location: 115654-116673 bp Feature: domain Description: PRK13927 Location: 115672-116662 bp Feature: domain Description: PRK1 3927 Location: 1 1 5672-1 1 6662 bp Feature: gene Location: 116715-117566 bp Feature: domain Description: PRK13922 Location: 116718-117546 bp Feature: domain Description: PRK1 3922 Location: 1 1 671 8-1 1 7546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00148 (Maf-like protein; Reviewed), PRK00024 (DNA repair protein RadC), RVT-GII, HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: NTRS01000019.1 Bacillus thuringiensis strain AFS022658 AFS022658_100_B12_Contig19_140514, whole genome shotgun sequence (51221 bp)
Overview 1 RT 1: 30435-35013 bp Neighborhood of RT #1 [30435, 35036] DDE_Tnp_1 RVT-GII GIIM MhpC Feature: gene Location: 30435-31553 bp Feature: domain Description: DDE_Tnp_1 Location: 30852-31539 bp Feature: domain Description: DDE_Tnp_1 Location: 30852 -31539 bp Feature: gene Location: 31565-31813 bp Feature: gene Location: 32058-33362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32343-32982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 343-32 982 bp Feature: domain Description: GIIM Note: maturase Location: 33057-33282 bp Feature: domain Description: GIIM Note: maturase Location: 33057-332 82 bp Feature: gene Location: 33632-33895 bp Feature: gene Location: 34182-35036 bp Feature: domain Description: MhpC Location: 34212-35013 bp Feature: domain Description: MhpC Location: 342 12 -35013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), MhpC (COG0596)