myRT

myRT report for GCA_002561465.1_ASM256146v1

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Seq: NTUS01000104.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig104_140523, whole genome shotgun sequence (2882 bp)
Overview 1 RT 1: 129-2867 bp Neighborhood of RT #1 [129, 2881] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 129-398 bp Feature: gene Location: 665-1996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974-1 61 3 bp Feature: domain Description: GIIM Note: maturase Location: 1688-1913 bp Feature: domain Description: GIIM Note: maturase Location: 1 688-1 91 3 bp Feature: gene Location: 2146-2325 bp Feature: gene Location: 2477-2881 bp Feature: domain Description: DDE_Tnp_1 Location: 2483-2867 bp Feature: domain Description: DDE_Tnp_1 Location: 2483-2867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: NTUS01000124.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig124_140523, whole genome shotgun sequence (53394 bp)
Overview 1 RT 1: 1715-6239 bp Neighborhood of RT #1 [1715, 6250] RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Feature: gene Location: 1715-2221 bp Feature: domain Description: RimL Location: 1724-2219 bp Feature: domain Description: RimL Location: 172 4-2 2 19 bp Feature: gene Location: 2590-2721 bp Feature: gene Location: 2723-4546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2987-3821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 987-382 1 bp Feature: domain Description: Intron_maturas2 Location: 3890-4229 bp Feature: domain Description: Intron_maturas2 Location: 3890-42 2 9 bp Feature: domain Description: HNHc Note: nucleases Location: 4367-4523 bp Feature: domain Description: HNHc Note: nucleases Location: 4367-452 3 bp Feature: gene Location: 5122-5703 bp Feature: domain Description: Lysozyme_like Location: 5257-5692 bp Feature: domain Description: Lysozyme_like Location: 52 57-5692 bp Feature: gene Location: 6119-6250 bp Feature: domain Description: YxeA Location: 6146-6239 bp Feature: domain Description: YxeA Location: 6146-62 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), YxeA (COG5294)

Seq: NTUS01000146.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig146_140523, whole genome shotgun sequence (19747 bp)
Overview 1 RT 1: 12391-19744 bp Neighborhood of RT #1 [12391, 19744] RVT-GII HNHc T4SS-DNA_transf T4SS-DNA_transf Feature: gene Location: 12391-13071 bp Feature: gene Location: 13269-13502 bp Feature: gene Location: 13790-15619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14090-14792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14090-14792 bp Feature: domain Description: HNHc Note: nucleases Location: 15371-15503 bp Feature: domain Description: HNHc Note: nucleases Location: 153 71-15503 bp Feature: gene Location: 15820-17709 bp Feature: domain Description: T4SS-DNA_transf Location: 15829-16312 bp Feature: domain Description: T4SS-DNA_transf Location: 15829-163 12 bp Feature: domain Description: T4SS-DNA_transf Location: 16702-17218 bp Feature: domain Description: T4SS-DNA_transf Location: 16702-17218 bp Feature: gene Location: 17741-19744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), T4SS-DNA_transf (pfam02534)

Seq: NTUS01000181.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig181_140523, whole genome shotgun sequence (2607 bp)
Overview 1 RT 1: 740-2393 bp Neighborhood of RT #1 [740, 2509] RVT-GII HNHc Feature: gene Location: 740-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NTUS01000201.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig201_140523, whole genome shotgun sequence (2607 bp)
Overview 1 RT 1: 710-2396 bp Neighborhood of RT #1 [710, 2509] RVT-GII HNHc Feature: gene Location: 710-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1700 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2396 bp Feature: domain Description: HNHc Note: nucleases Location: 225 8-2396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NTUS01000042.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig42_140523, whole genome shotgun sequence (6072 bp)
Overview 1 RT 1: 96-2866 bp Neighborhood of RT #1 [96, 2866] CwlT_like RVT-GII Intron_maturas2 KOG4768 Feature: gene Location: 96-332 bp Feature: domain Description: CwlT_like Location: 105-321 bp Feature: domain Description: CwlT_like Location: 105-321 bp Feature: gene Location: 908-2380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1172-2006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1172-2006 bp Feature: domain Description: Intron_maturas2 Location: 2078-2348 bp Feature: domain Description: Intron_maturas2 Location: 2078-2348 bp Feature: gene Location: 2398-2733 bp Feature: domain Description: KOG4768 Location: 2485-2725 bp Feature: domain Description: KOG476 8 Location: 2485-2725 bp Feature: gene Location: 2735-2866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348), CwlT_like

Seq: NTUS01000051.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig51_140523, whole genome shotgun sequence (91292 bp)
Overview 1 RT 1: 61306-65031 bp Neighborhood of RT #1 [61306, 65031] Peptidases_S8_Subtilisin_subset RVT-GII RVT-GII Feature: gene Location: 61306-62091 bp Feature: gene Location: 62107-63078 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 62326-62974 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 62326-6297 4 bp Feature: gene Location: 63626-64111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63632-63932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63632-63932 bp Feature: gene Location: 64186-64452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64204-64423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64204-64423 bp Feature: gene Location: 64588-64740 bp Feature: gene Location: 64762-65031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_Subtilisin_subset (cd07477), RVT-GII

Seq: NTUS01000055.1 Bacillus thuringiensis strain AFS015413 AFS015413_107_D9_Contig55_140523, whole genome shotgun sequence (39285 bp)
Overview 1 RT 1: 9556-13859 bp Neighborhood of RT #1 [9556, 13859] E1_enzyme_family RVT-GII Intron_maturas2 HNHc PRTRC_ThiF Feature: gene Location: 9556-9951 bp Feature: gene Location: 9971-10153 bp Feature: domain Description: E1_enzyme_family Location: 10019-10136 bp Feature: domain Description: E1_enzyme_family Location: 10019-10136 bp Feature: gene Location: 10722-12662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11052-11889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11052-118 8 9 bp Feature: domain Description: Intron_maturas2 Location: 12021-12270 bp Feature: domain Description: Intron_maturas2 Location: 12021-12270 bp Feature: domain Description: HNHc Note: nucleases Location: 12456-12609 bp Feature: domain Description: HNHc Note: nucleases Location: 12456-12609 bp Feature: gene Location: 12986-13468 bp Feature: domain Description: PRTRC_ThiF Location: 13001-13439 bp Feature: domain Description: PRTRC_ThiF Location: 13001-13439 bp Feature: gene Location: 13488-13859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRTRC_ThiF (TIGR03736), E1_enzyme_family (cl22428)