myRT

myRT report for GCA_002562255.1_ASM256225v1

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Seq: NTWK01000028.1 Bacillus cereus strain AFS009781 AFS009781_107_A8_Contig28_140523, whole genome shotgun sequence (75471 bp)
Overview 1 RT 1: 31216-38338 bp Neighborhood of RT #1 [31216, 38338] Sm_multidrug_ex TraG-D_C Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 31216-31692 bp Feature: domain Description: Sm_multidrug_ex Location: 31306-31645 bp Feature: domain Description: Sm_multidrug_ex Location: 31 306-31 645 bp Feature: gene Location: 31979-33742 bp Feature: domain Description: TraG-D_C Location: 32030-32390 bp Feature: domain Description: TraG-D_C Location: 32030-32390 bp Feature: domain Description: Ftsk_gamma Location: 32798-32975 bp Feature: domain Description: Ftsk_gamma Location: 32798-32975 bp Feature: gene Location: 33936-35645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34098-34923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34098-34923 bp Feature: domain Description: Intron_maturas2 Location: 35004-35295 bp Feature: domain Description: Intron_maturas2 Location: 35004-35295 bp Feature: domain Description: HNHc Note: nucleases Location: 35442-35619 bp Feature: domain Description: HNHc Note: nucleases Location: 35442-3561 9 bp Feature: gene Location: 36339-37850 bp Feature: gene Location: 37802-38338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sm_multidrug_ex (pfam06695), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NTWK01000075.1 Bacillus cereus strain AFS009781 AFS009781_107_A8_Contig75_140523, whole genome shotgun sequence (197126 bp)
Overview 1 RT 1: 18887-26645 bp Neighborhood of RT #1 [18887, 26659] RimP polC RVT-GII HNHc polC Feature: gene Location: 18887-19357 bp Feature: domain Description: RimP Location: 18893-19355 bp Feature: domain Description: RimP Location: 18893-19355 bp Feature: gene Location: 19691-21130 bp Feature: domain Description: polC Location: 19724-21128 bp Feature: domain Description: polC Location: 1972 4-2 112 8 bp Feature: gene Location: 21204-23030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21510-22206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1510-2 2 2 06 bp Feature: domain Description: HNHc Note: nucleases Location: 22761-22911 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 761-2 2 911 bp Feature: gene Location: 23195-23458 bp Feature: gene Location: 23747-26659 bp Feature: domain Description: polC Location: 23765-26645 bp Feature: domain Description: polC Location: 2 3765-2 6645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimP (COG0779), polC (TIGR00354), RVT-GII, HNHc (smart00507)

Seq: NTWK01000077.1 Bacillus cereus strain AFS009781 AFS009781_107_A8_Contig77_140523, whole genome shotgun sequence (34812 bp)
Overview 1 RT 1: 4031-8636 bp Neighborhood of RT #1 [4031, 8644] AAA_15 YbjD RVT-Retrons COG4127 COG4127 Feature: gene Location: 4031-4528 bp Feature: domain Description: AAA_15 Location: 4034-4421 bp Feature: domain Description: AAA_15 Location: 403 4-4421 bp Feature: gene Location: 4544-6037 bp Feature: domain Description: YbjD Location: 4580-5183 bp Feature: domain Description: YbjD Location: 4580-5183 bp Feature: gene Location: 6208-7248 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6334-6901 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63 3 4-6901 bp Feature: gene Location: 7858-8100 bp Feature: domain Description: COG4127 Location: 7861-8071 bp Feature: domain Description: COG4127 Location: 7861-8071 bp Feature: gene Location: 8156-8644 bp Feature: domain Description: COG4127 Location: 8165-8636 bp Feature: domain Description: COG4127 Location: 8165-863 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), YbjD (COG3593), RVT-Retrons, COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily )