myRT

myRT report for GCA_002562365.1_ASM256236v1

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Seq: NTWQ01000118.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig118_140514, whole genome shotgun sequence (3595 bp)
Overview 1 RT 1: 384-3509 bp Neighborhood of RT #1 [384, 3592] HTH_Mga Mga PRD PTS_IIB_bgl_like DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 384-1826 bp Feature: domain Description: HTH_Mga Location: 390-564 bp Feature: domain Description: HTH_Mga Location: 390-564 bp Feature: domain Description: Mga Location: 597-849 bp Feature: domain Description: Mga Location: 597-849 bp Feature: domain Description: PRD Location: 1152-1317 bp Feature: domain Description: PRD Location: 1 1 52-1 31 7 bp Feature: domain Description: PTS_IIB_bgl_like Location: 1572-1821 bp Feature: domain Description: PTS_IIB_bgl_like Location: 1 572-1 821 bp Feature: gene Location: 2526-2939 bp Feature: domain Description: DDE_Tnp_1 Location: 2562-2664 bp Feature: domain Description: DDE_Tnp_1 Location: 2562-2664 bp Feature: gene Location: 3056-3592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3080-3209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3080-3209 bp Feature: domain Description: GIIM Note: maturase Location: 3284-3509 bp Feature: domain Description: GIIM Note: maturase Location: 3284-3509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), HTH_Mga (pfam08280), Mga (pfam05043), PRD (pfam00874), PTS_IIB_bgl_like (cd05568)

Seq: NTWQ01000157.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig157_140514, whole genome shotgun sequence (1862 bp)
Overview 1 RT 1: 84-1492 bp Neighborhood of RT #1 [84, 1492] RVT-GII GIIM Feature: gene Location: 84-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249-864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 49-864 bp Feature: domain Description: GIIM Note: maturase Location: 924-1131 bp Feature: domain Description: GIIM Note: maturase Location: 92 4-1131 bp Feature: gene Location: 1340-1492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NTWQ01000015.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig15_140514, whole genome shotgun sequence (56948 bp)
Overview 1 RT 1: 52092-56945 bp Neighborhood of RT #1 [52092, 56945] HTH_MlrA-like_sg2 DUF3967 RVT-GII Feature: gene Location: 52092-52691 bp Feature: domain Description: HTH_MlrA-like_sg2 Location: 52125-52290 bp Feature: domain Description: HTH_MlrA-like_sg2 Location: 52125-52290 bp Feature: domain Description: DUF3967 Location: 52560-52638 bp Feature: domain Description: DUF3 967 Location: 52560-5263 8 bp Feature: gene Location: 52874-53161 bp Feature: gene Location: 54441-54746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54444-54741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54444-54741 bp Feature: gene Location: 55374-55589 bp Feature: gene Location: 56616-56945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MlrA-like_sg2 (cd04765), DUF3967 (pfam13152), RVT-GII

Seq: NTWQ01000185.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig185_140514, whole genome shotgun sequence (279 bp)
Overview 1 RT 1: 3-279 bp Neighborhood of RT #1 [3, 278] RVT-GII Feature: gene Location: 3-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192-279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192-279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NTWQ01000002.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig2_140514, whole genome shotgun sequence (778 bp)
Overview 1 RT 1: 1-550 bp Neighborhood of RT #1 [1, 630] RVT-GII GIIM Feature: gene Location: 1-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-25 0 bp Feature: domain Description: GIIM Note: maturase Location: 325-550 bp Feature: domain Description: GIIM Note: maturase Location: 325 -5 5 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NTWQ01000032.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig32_140514, whole genome shotgun sequence (135113 bp)
Overview 1 RT 1: 80957-85566 bp Neighborhood of RT #1 [80957, 85568] YxeA Lysozyme_like RVT-GII RVT-GII HNHc CwlT_like RimL Feature: gene Location: 80957-81088 bp Feature: domain Description: YxeA Location: 80984-81077 bp Feature: domain Description: YxeA Location: 80984-81077 bp Feature: gene Location: 81503-81823 bp Feature: domain Description: Lysozyme_like Location: 81638-81785 bp Feature: domain Description: Lysozyme_like Location: 816 38-81785 bp Feature: gene Location: 82512-83195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82770-83193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82770-83193 bp Feature: gene Location: 83265-84281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83271-83466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83271-8346 6 bp Feature: domain Description: HNHc Note: nucleases Location: 84027-84165 bp Feature: domain Description: HNHc Note: nucleases Location: 84027-8416 5 bp Feature: gene Location: 84420-84758 bp Feature: domain Description: CwlT_like Location: 84426-84705 bp Feature: domain Description: CwlT_like Location: 84426 -84705 bp Feature: gene Location: 85062-85568 bp Feature: domain Description: RimL Location: 85071-85566 bp Feature: domain Description: RimL Location: 85071-8556 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YxeA (COG5294), Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507), CwlT_like, RimL (COG1670)

Seq: NTWQ01000003.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig3_140514, whole genome shotgun sequence (14792 bp)
Overview 1 RT 1: 4857-7969 bp Neighborhood of RT #1 [4857, 7969] DDE_Tnp_1 RVT-GII RVT-GII GIIM Feature: gene Location: 4857-5081 bp Feature: gene Location: 5092-5703 bp Feature: domain Description: DDE_Tnp_1 Location: 5182-5572 bp Feature: domain Description: DDE_Tnp_1 Location: 5182-557 2 bp Feature: gene Location: 6134-6517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6419-6506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6419-6506 bp Feature: gene Location: 6599-6970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6608-6920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6608-6920 bp Feature: gene Location: 7102-7266 bp Feature: domain Description: GIIM Note: maturase Location: 7132-7249 bp Feature: domain Description: GIIM Note: maturase Location: 7 132-7 249 bp Feature: gene Location: 7715-7969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: NTWQ01000077.1 Bacillus cereus strain AFS009283 AFS009283_95_E10_Contig77_140514, whole genome shotgun sequence (994 bp)
Overview 1 RT 1: 3-871 bp Neighborhood of RT #1 [3, 871] RVT-GII Feature: gene Location: 3-518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28 8 -519 bp Feature: gene Location: 692-871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII