myRT

myRT report for GCA_002562975.1_ASM256297v1

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Seq: NTSS01000012.1 Bacillus thuringiensis strain AFS029475 AFS029475_115_D5_Contig12_140618, whole genome shotgun sequence (244007 bp)
Overview 1 RT 1: 214755-220804 bp Neighborhood of RT #1 [214755, 220824] PRK00148 PRK00024 RVT-GII HNHc PRK13927 PRK13922 Feature: gene Location: 214755-215330 bp Feature: domain Description: PRK00148 Location: 214764-215325 bp Feature: domain Description: PRK001 48 Location: 21 4764-21 5325 bp Feature: gene Location: 215377-216018 bp Feature: domain Description: PRK00024 Location: 215389-216004 bp Feature: domain Description: PRK00024 Location: 21 5389-21 6004 bp Feature: gene Location: 216719-218590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217040-217748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 7040-21 7748 bp Feature: domain Description: HNHc Note: nucleases Location: 218342-218510 bp Feature: domain Description: HNHc Note: nucleases Location: 21 8342-21 851 0 bp Feature: gene Location: 218912-219931 bp Feature: domain Description: PRK13927 Location: 218930-219920 bp Feature: domain Description: PRK1 3927 Location: 21 8930-21 9920 bp Feature: gene Location: 219973-220824 bp Feature: domain Description: PRK13922 Location: 219976-220804 bp Feature: domain Description: PRK1 3922 Location: 21 9976-220804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00148 (Maf-like protein; Reviewed), PRK00024 (DNA repair protein RadC), RVT-GII, HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: NTSS01000013.1 Bacillus thuringiensis strain AFS029475 AFS029475_115_D5_Contig13_140618, whole genome shotgun sequence (62948 bp)
Overview 1 RT 1: 8667-11914 bp Neighborhood of RT #1 [8667, 11922] PRK06760 RVT-GII DDE_Tnp_1 Feature: gene Location: 8667-9371 bp Feature: domain Description: PRK06760 Location: 8673-9351 bp Feature: domain Description: PRK06760 Location: 8673-9351 bp Feature: gene Location: 9388-9552 bp Feature: gene Location: 10465-10887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10468-10813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10468-10813 bp Feature: gene Location: 11391-11636 bp Feature: gene Location: 11707-11922 bp Feature: domain Description: DDE_Tnp_1 Location: 11731-11914 bp Feature: domain Description: DDE_Tnp_1 Location: 11731-11914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06760 (hypothetical protein; Provisional), RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: NTSS01000049.1 Bacillus thuringiensis strain AFS029475 AFS029475_115_D5_Contig49_140618, whole genome shotgun sequence (47784 bp)
Overview 1 RT 1: 1909-8759 bp Neighborhood of RT #1 [1909, 8759] DEXDc RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1909-2136 bp Feature: gene Location: 2160-4793 bp Feature: domain Description: DEXDc Location: 2988-3939 bp Feature: domain Description: DEXDc Location: 2988-3 93 9 bp Feature: gene Location: 5397-7205 bp Feature: domain Description: RVT_N Location: 5448-5688 bp Feature: domain Description: RVT_N Location: 5448-5688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5748-6402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5748-6402 bp Feature: domain Description: GIIM Note: maturase Location: 6465-6699 bp Feature: domain Description: GIIM Note: maturase Location: 6465-6699 bp Feature: domain Description: HNHc Note: nucleases Location: 6912-7059 bp Feature: domain Description: HNHc Note: nucleases Location: 6912-7059 bp Feature: gene Location: 7358-8029 bp Feature: gene Location: 8046-8759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NTSS01000094.1 Bacillus thuringiensis strain AFS029475 AFS029475_115_D5_Contig94_140618, whole genome shotgun sequence (4773 bp)
Overview 1 RT 1: 1-4452 bp Neighborhood of RT #1 [1, 4511] CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 1-1077 bp Feature: domain Description: CwlT_like Location: 625-1066 bp Feature: domain Description: CwlT_like Location: 625-1066 bp Feature: gene Location: 1653-3476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1917-2751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1917-2751 bp Feature: domain Description: Intron_maturas2 Location: 2820-3159 bp Feature: domain Description: Intron_maturas2 Location: 2820-3159 bp Feature: domain Description: HNHc Note: nucleases Location: 3297-3453 bp Feature: domain Description: HNHc Note: nucleases Location: 3297-34 53 bp Feature: gene Location: 3478-3612 bp Feature: gene Location: 3636-4511 bp Feature: domain Description: NlpD Location: 3651-4080 bp Feature: domain Description: NlpD Location: 3651-4 080 bp Feature: domain Description: Spr Location: 4116-4452 bp Feature: domain Description: Spr Location: 4 116-4 4 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: NTSS01000095.1 Bacillus thuringiensis strain AFS029475 AFS029475_115_D5_Contig95_140618, whole genome shotgun sequence (2493 bp)
Overview 1 RT 1: 49-1837 bp Neighborhood of RT #1 [49, 1866] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 49-1866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-1141 bp Feature: domain Description: Intron_maturas2 Location: 1222-1516 bp Feature: domain Description: Intron_maturas2 Location: 1222-15 16 bp Feature: domain Description: HNHc Note: nucleases Location: 1663-1837 bp Feature: domain Description: HNHc Note: nucleases Location: 1663-1837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)