myRT

myRT report for GCA_002563205.1_ASM256320v1

Download annotations/find similar RTs

Seq: NTSL01000117.1 Bacillus thuringiensis strain AFS020602 AFS020602_104_G4_Contig117_140523, whole genome shotgun sequence (33856 bp)
Overview 1 RT 1: 5411-9135 bp Neighborhood of RT #1 [5411, 9135] RVT-GII RVT-GII GIIM Peptidases_S8_Subtilisin_subset Feature: gene Location: 5411-5680 bp Feature: gene Location: 5702-5854 bp Feature: gene Location: 5990-6256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6008-6227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6008-6227 bp Feature: gene Location: 6331-6999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6337-6637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6337-6637 bp Feature: domain Description: GIIM Note: maturase Location: 6718-6946 bp Feature: domain Description: GIIM Note: maturase Location: 671 8-6946 bp Feature: gene Location: 7363-8334 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 7582-8230 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 7582-8230 bp Feature: gene Location: 8350-9135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Peptidases_S8_Subtilisin_subset (cd07477)

Seq: NTSL01000129.1 Bacillus thuringiensis strain AFS020602 AFS020602_104_G4_Contig129_140523, whole genome shotgun sequence (22025 bp)
Overview 1 RT 1: 11990-19360 bp Neighborhood of RT #1 [11990, 19360] rpsA TraG-D_C Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 11990-12973 bp Feature: domain Description: rpsA Location: 12257-12794 bp Feature: domain Description: rpsA Location: 12 2 57-12 794 bp Feature: gene Location: 13232-14755 bp Feature: domain Description: TraG-D_C Location: 13283-13643 bp Feature: domain Description: TraG-D_C Location: 132 83-13643 bp Feature: domain Description: Ftsk_gamma Location: 14078-14237 bp Feature: domain Description: Ftsk_gamma Location: 14078-142 37 bp Feature: gene Location: 14949-16658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15111-15933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15111-15933 bp Feature: domain Description: Intron_maturas2 Location: 16014-16308 bp Feature: domain Description: Intron_maturas2 Location: 16014-16308 bp Feature: domain Description: HNHc Note: nucleases Location: 16455-16629 bp Feature: domain Description: HNHc Note: nucleases Location: 16455-1662 9 bp Feature: gene Location: 17358-18869 bp Feature: gene Location: 18887-19360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NTSL01000067.1 Bacillus thuringiensis strain AFS020602 AFS020602_104_G4_Contig67_140523, whole genome shotgun sequence (88828 bp)
Overview 1 RT 1: 85259-88041 bp Neighborhood of RT #1 [85259, 88433] PinE RVT-Retrons Feature: gene Location: 85259-85894 bp Feature: domain Description: PinE Location: 85304-85883 bp Feature: domain Description: PinE Location: 853 04-85883 bp Feature: gene Location: 86225-87142 bp Feature: gene Location: 87324-88433 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87480-88041 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87480-88041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-Retrons