myRT

myRT report for GCA_002563815.1_ASM256381v1

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Seq: PDJM01000001.1 Marinobacter sp. LV10R520-4 Ga0070250_11, whole genome shotgun sequence (4421958 bp)
Overview 1 RT 1: 451088-456131 bp 2 RT 2: 1731789-1734439 bp 3 RT 3: 2968664-2971795 bp 4 RT 4: 3386932-3390662 bp Neighborhood of RT #1 [451088, 456160] PRK03757 CybB RVT-GII RVT-GII Phage_int_SAM_1 INT_RitA_C_like Neighborhood of RT #2 [1731789, 1734439] RVT-GII GIIM Neighborhood of RT #3 [2968664, 2971795] BLUF RVT-GII Neighborhood of RT #4 [3386932, 3390664] RVT-GII GIIM PRK08665 Feature: gene Location: 451088-451669 bp Feature: domain Description: PRK03757 Location: 451091-451667 bp Feature: domain Description: PRK03757 Location: 451 091 -451 667 bp Feature: gene Location: 451710-452255 bp Feature: domain Description: CybB Location: 451722-452253 bp Feature: domain Description: CybB Location: 451 722-452253 bp Feature: gene Location: 452981-453601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453023-453221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453023-453221 bp Feature: gene Location: 453508-453930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453589-453892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453589-453892 bp Feature: gene Location: 453962-454357 bp Feature: gene Location: 454922-456160 bp Feature: domain Description: Phage_int_SAM_1 Location: 455285-455528 bp Feature: domain Description: Phage_int_SAM_1 Location: 455285-455528 bp Feature: domain Description: INT_RitA_C_like Location: 455612-456131 bp Feature: domain Description: INT_RitA_C_like Location: 45561 2-4561 31 bp Feature: gene Location: 1731789-1732109 bp Feature: gene Location: 1732232-1732609 bp Feature: gene Location: 1732688-1734022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1732967-1733585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 732967-1 733585 bp Feature: domain Description: GIIM Note: maturase Location: 1733627-1733855 bp Feature: domain Description: GIIM Note: maturase Location: 1 733627-1 733855 bp Feature: gene Location: 1734096-1734224 bp Feature: gene Location: 1734281-1734439 bp Feature: gene Location: 2968664-2969122 bp Feature: gene Location: 2969182-2969433 bp Feature: domain Description: BLUF Location: 2969191-2969287 bp Feature: domain Description: BLUF Location: 29691 91 -2969287 bp Feature: gene Location: 2969392-2970048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969491-2969668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969491 -2969668 bp Feature: gene Location: 2970194-2970352 bp Feature: gene Location: 2970650-2971795 bp Feature: gene Location: 3386932-3387096 bp Feature: gene Location: 3387103-3387318 bp Feature: gene Location: 3387370-3388704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3387649-3388267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3387649-3388267 bp Feature: domain Description: GIIM Note: maturase Location: 3388309-3388537 bp Feature: domain Description: GIIM Note: maturase Location: 3388309-3388537 bp Feature: gene Location: 3388815-3389174 bp Feature: gene Location: 3389978-3390664 bp Feature: domain Description: PRK08665 Location: 3390035-3390662 bp Feature: domain Description: PRK08665 Location: 3390035-3390662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03757 (YceI family protein), CybB (COG3038), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), GIIM (pfam08388), BLUF (smart01034), PRK08665 (vitamin B12-dependent ribonucleotide reductase)