myRT

myRT report for GCA_002564585.1_ASM256458v1

Download annotations/find similar RTs

Seq: NUVC01000041.1 Bacillus cereus strain AFS087654 AFS087654_105_E9_Contig41_140523, whole genome shotgun sequence (18356 bp)
Overview 1 RT 1: 2449-7347 bp Neighborhood of RT #1 [2449, 7388] DDE_Tnp_1 DDE_Tnp_1 RVT-GII GIIM MFS_NepI_like Feature: gene Location: 2449-3156 bp Feature: domain Description: DDE_Tnp_1 Location: 2806-3142 bp Feature: domain Description: DDE_Tnp_1 Location: 2806-31 42 bp Feature: gene Location: 3205-3507 bp Feature: domain Description: DDE_Tnp_1 Location: 3322-3493 bp Feature: domain Description: DDE_Tnp_1 Location: 3322-3493 bp Feature: gene Location: 3769-5100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4078-4717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4078-471 7 bp Feature: domain Description: GIIM Note: maturase Location: 4792-5017 bp Feature: domain Description: GIIM Note: maturase Location: 4792-501 7 bp Feature: gene Location: 5367-5630 bp Feature: gene Location: 6141-7388 bp Feature: domain Description: MFS_NepI_like Location: 6237-7347 bp Feature: domain Description: MFS_NepI_like Location: 6237-7347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), MFS_NepI_like (cd17324)

Seq: NUVC01000065.1 Bacillus cereus strain AFS087654 AFS087654_105_E9_Contig65_140523, whole genome shotgun sequence (31588 bp)
Overview 1 RT 1: 1947-8809 bp Neighborhood of RT #1 [1947, 9207] INT_ICEBs1_C_like RVT-Retrons COG4637 YbjD AbiJ_NTD4 Feature: gene Location: 1947-2288 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1953-2232 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1953-2 2 32 bp Feature: gene Location: 2523-3380 bp Feature: gene Location: 4330-5289 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4381-4936 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4381-4936 bp Feature: gene Location: 5564-7507 bp Feature: domain Description: COG4637 Location: 5582-5738 bp Feature: domain Description: COG4637 Location: 5582 -5738 bp Feature: domain Description: YbjD Location: 6251-6941 bp Feature: domain Description: YbjD Location: 62 51-6941 bp Feature: gene Location: 8371-9207 bp Feature: domain Description: AbiJ_NTD4 Location: 8374-8809 bp Feature: domain Description: AbiJ_NTD4 Location: 8374-8809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-Retrons, COG4637 (Predicted ATPase ), YbjD (COG3593), AbiJ_NTD4 (pfam18863)