myRT

myRT report for GCA_002564755.1_ASM256475v1

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Seq: NUWU01000008.1 Bacillus megaterium strain AFS082415 AFS082415_116_H9_Contig10_140618, whole genome shotgun sequence (20339 bp)
Overview 1 RT 1: 12710-18537 bp Neighborhood of RT #1 [12710, 18537] YflT TIGR02271 RVT_N RVT-GII GIIM DUF4046 DUF4046 Feature: gene Location: 12710-13807 bp Feature: domain Description: YflT Location: 12737-13061 bp Feature: domain Description: YflT Location: 1 2737-1 3061 bp Feature: domain Description: TIGR02271 Location: 13148-13481 bp Feature: domain Description: TIGR02271 Location: 1 31 48-1 3481 bp Feature: gene Location: 14141-14311 bp Feature: gene Location: 14478-16127 bp Feature: RT Description: RVT_N Location: 14526-14769 bp Feature: RT Description: RVT_N Location: 1 4526-1 4769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14826-15486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4826-1 5486 bp Feature: domain Description: GIIM Note: maturase Location: 15552-15786 bp Feature: domain Description: GIIM Note: maturase Location: 1 5552-1 5786 bp Feature: gene Location: 17440-18216 bp Feature: domain Description: DUF4046 Location: 17458-17644 bp Feature: domain Description: DUF4046 Location: 1 7458-1 7644 bp Feature: domain Description: DUF4046 Location: 17725-17887 bp Feature: domain Description: DUF4046 Location: 1 7725-1 7887 bp Feature: gene Location: 18304-18537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YflT (pfam11181), TIGR02271 (conserved domain), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4046 (pfam13255)

Seq: NUWU01000009.1 Bacillus megaterium strain AFS082415 AFS082415_116_H9_Contig11_140618, whole genome shotgun sequence (778250 bp)
Overview 1 RT 1: 211407-216067 bp Neighborhood of RT #1 [211407, 216105] DAO RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 211407-211547 bp Feature: gene Location: 211586-212773 bp Feature: domain Description: DAO Location: 211820-212768 bp Feature: domain Description: DAO Location: 2 1182 0-2 12 768 bp Feature: gene Location: 213346-215169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213610-214444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 13610-2 14444 bp Feature: domain Description: Intron_maturas2 Location: 214516-214816 bp Feature: domain Description: Intron_maturas2 Location: 2 14516-2 14816 bp Feature: domain Description: HNHc Note: nucleases Location: 214990-215143 bp Feature: domain Description: HNHc Note: nucleases Location: 2 14990-2 15143 bp Feature: gene Location: 215173-215337 bp Feature: gene Location: 215533-216105 bp Feature: domain Description: RimL Location: 215539-216067 bp Feature: domain Description: RimL Location: 2 15539-2 16067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAO (pfam01266), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670)

Seq: NUWU01000156.1 Bacillus megaterium strain AFS082415 AFS082415_116_H9_Contig20_140618, whole genome shotgun sequence (50714 bp)
Overview 1 RT 1: 47625-50155 bp Neighborhood of RT #1 [47625, 50157] DUF3231 DUF3231 RVT-GII GIIM Feature: gene Location: 47625-48629 bp Feature: domain Description: DUF3231 Location: 47640-48096 bp Feature: domain Description: DUF3 23 1 Location: 47640-48096 bp Feature: domain Description: DUF3231 Location: 48132-48612 bp Feature: domain Description: DUF3 23 1 Location: 4813 2-48612 bp Feature: gene Location: 48874-49305 bp Feature: gene Location: 49339-50157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49345-49981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493 45-49981 bp Feature: domain Description: GIIM Note: maturase Location: 50047-50155 bp Feature: domain Description: GIIM Note: maturase Location: 50047-50155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3231 (pfam11553), RVT-GII, GIIM (pfam08388)

Seq: NUWU01000019.1 Bacillus megaterium strain AFS082415 AFS082415_116_H9_Contig36_140618, whole genome shotgun sequence (29865 bp)
Overview 1 RT 1: 23621-28184 bp Neighborhood of RT #1 [23621, 28184] RVT_N RVT-GII GIIM Feature: gene Location: 23621-23809 bp Feature: gene Location: 23906-24208 bp Feature: gene Location: 24368-26017 bp Feature: RT Description: RVT_N Location: 24416-24662 bp Feature: RT Description: RVT_N Location: 24 4 16-24 662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24716-25376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 716-25376 bp Feature: domain Description: GIIM Note: maturase Location: 25442-25676 bp Feature: domain Description: GIIM Note: maturase Location: 254 4 2-25676 bp Feature: gene Location: 26667-27221 bp Feature: gene Location: 27459-28184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)