myRT

myRT report for GCA_002565535.1_ASM256553v1

Download annotations/find similar RTs

Seq: NUWY01000019.1 Bacillus megaterium strain AFS081975 AFS081975_60_C6_Contig19_140312, whole genome shotgun sequence (73933 bp)
Overview 1 RT 1: 61691-67474 bp Neighborhood of RT #1 [61691, 67491] 2a38 YdeN RVT_N RVT-GII GIIM DUF3231 DUF3231 Feature: gene Location: 61691-63046 bp Feature: domain Description: 2a38 Location: 61796-62954 bp Feature: domain Description: 2a38 Location: 61 796-62954 bp Feature: gene Location: 63284-63850 bp Feature: domain Description: YdeN Location: 63293-63842 bp Feature: domain Description: YdeN Location: 63293-63842 bp Feature: gene Location: 64557-65777 bp Feature: domain Description: RVT_N Location: 64641-64884 bp Feature: domain Description: RVT_N Location: 64641 -64884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64941-65601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64941 -65601 bp Feature: domain Description: GIIM Note: maturase Location: 65667-65775 bp Feature: domain Description: GIIM Note: maturase Location: 65667-65775 bp Feature: gene Location: 65811-66242 bp Feature: gene Location: 66487-67491 bp Feature: domain Description: DUF3231 Location: 66502-66958 bp Feature: domain Description: DUF3231 Location: 66502-66958 bp Feature: domain Description: DUF3231 Location: 66994-67474 bp Feature: domain Description: DUF3231 Location: 66994-67474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2a38 (TIGR00933), YdeN (COG3545), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3231 (pfam11553)

Seq: NUWY01000001.1 Bacillus megaterium strain AFS081975 AFS081975_60_C6_Contig1_140312, whole genome shotgun sequence (2851871 bp)
Overview 1 RT 1: 832099-844668 bp Neighborhood of RT #1 [832099, 844787] PRK06835 PDDEXK_4 RVT-UG12 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 CPBP Feature: gene Location: 832099-836469 bp Feature: domain Description: PRK06835 Location: 833089-833284 bp Feature: domain Description: PRK06835 Location: 833089-8332 84 bp Feature: gene Location: 836816-837907 bp Feature: domain Description: PDDEXK_4 Location: 836924-837317 bp Feature: domain Description: PDDEXK_4 Location: 83692 4-837317 bp Feature: gene Location: 838666-840627 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 839050-839503 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 839050-839503 bp Feature: gene Location: 841350-843698 bp Feature: domain Description: DUF4379 Location: 841389-841557 bp Feature: domain Description: DUF4379 Location: 841389-841557 bp Feature: domain Description: DUF4379 Location: 841605-841767 bp Feature: domain Description: DUF4379 Location: 841605-841767 bp Feature: domain Description: DUF4379 Location: 841815-841977 bp Feature: domain Description: DUF4379 Location: 841815-841977 bp Feature: domain Description: DUF4379 Location: 842025-842181 bp Feature: domain Description: DUF4379 Location: 842 02 5-842 181 bp Feature: domain Description: DUF4379 Location: 842229-842385 bp Feature: domain Description: DUF4379 Location: 842 2 2 9-842 385 bp Feature: domain Description: DUF4379 Location: 842883-843045 bp Feature: domain Description: DUF4379 Location: 842 883-843045 bp Feature: domain Description: DUF4379 Location: 843093-843249 bp Feature: domain Description: DUF4379 Location: 843093-8432 49 bp Feature: domain Description: DUF4379 Location: 843297-843465 bp Feature: domain Description: DUF4379 Location: 8432 97-843465 bp Feature: domain Description: DUF4379 Location: 843513-843675 bp Feature: domain Description: DUF4379 Location: 843513-843675 bp Feature: gene Location: 844026-844787 bp Feature: domain Description: CPBP Location: 844401-844668 bp Feature: domain Description: CPBP Location: 844401-844668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06835 (DNA replication protein DnaC; Validated), PDDEXK_4 (pfam14281), RVT-UG12, DUF4379 (pfam14311), CPBP