myRT

myRT report for GCA_002565605.1_ASM256560v1

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Seq: NUXK01000031.1 Bacillus cereus strain AFS080704 AFS080704_108_D2_Contig31_140523, whole genome shotgun sequence (57659 bp)
Overview 1 RT 1: 3093-9840 bp Neighborhood of RT #1 [3093, 9840] T_den_put_tspse DUF3854 RVT-GII GIIM Feature: gene Location: 3093-3992 bp Feature: domain Description: T_den_put_tspse Location: 3135-3975 bp Feature: domain Description: T_den_put_tspse Location: 31 35-3975 bp Feature: gene Location: 4104-4463 bp Feature: domain Description: DUF3854 Location: 4275-4434 bp Feature: domain Description: DUF3854 Location: 4275-4434 bp Feature: gene Location: 4574-6451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4901-5594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4901 -5594 bp Feature: domain Description: GIIM Note: maturase Location: 5738-5867 bp Feature: domain Description: GIIM Note: maturase Location: 5738-5867 bp Feature: gene Location: 7163-8179 bp Feature: gene Location: 9562-9840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, GIIM (pfam08388)

Seq: NUXK01000003.1 Bacillus cereus strain AFS080704 AFS080704_108_D2_Contig3_140523, whole genome shotgun sequence (72928 bp)
Overview 1 RT 1: 6578-15261 bp Neighborhood of RT #1 [6578, 15320] TrbL CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 6578-10594 bp Feature: domain Description: TrbL Location: 6875-7355 bp Feature: domain Description: TrbL Location: 6875-7355 bp Feature: gene Location: 10591-11892 bp Feature: domain Description: CwlT_like Location: 11440-11881 bp Feature: domain Description: CwlT_like Location: 11440-11881 bp Feature: gene Location: 12468-14291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12732-13566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 732 -13566 bp Feature: domain Description: Intron_maturas2 Location: 13635-13974 bp Feature: domain Description: Intron_maturas2 Location: 13635-13974 bp Feature: domain Description: HNHc Note: nucleases Location: 14112-14268 bp Feature: domain Description: HNHc Note: nucleases Location: 14112 -142 68 bp Feature: gene Location: 14293-14427 bp Feature: gene Location: 14580-15320 bp Feature: domain Description: NlpD Location: 14589-14889 bp Feature: domain Description: NlpD Location: 14589-14889 bp Feature: domain Description: Spr Location: 14925-15261 bp Feature: domain Description: Spr Location: 1492 5-152 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), CwlT_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: NUXK01000005.1 Bacillus cereus strain AFS080704 AFS080704_108_D2_Contig5_140523, whole genome shotgun sequence (160570 bp)
Overview 1 RT 1: 38050-42840 bp Neighborhood of RT #1 [38050, 42848] SLATT_5 RVT-UNC HTH_26 Ank_2 ANK Feature: gene Location: 38050-38970 bp Feature: gene Location: 39226-39942 bp Feature: domain Description: SLATT_5 Location: 39262-39886 bp Feature: domain Description: SLATT_5 Location: 3 9262-3 9886 bp Feature: gene Location: 39955-41379 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 40411-40813 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 40411-40813 bp Feature: gene Location: 41482-41706 bp Feature: domain Description: HTH_26 Location: 41506-41686 bp Feature: domain Description: HTH_26 Location: 41506-41686 bp Feature: gene Location: 41955-42848 bp Feature: domain Description: Ank_2 Location: 42549-42756 bp Feature: domain Description: Ank_2 Location: 42549-42756 bp Feature: domain Description: ANK Location: 42768-42840 bp Feature: domain Description: ANK Location: 42768-42840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-AbiA/RVT-UG3/RVT-Retrons/RVT-UG23(RVT-UNC), HTH_26 (pfam13443), Ank_2 (pfam12796), ANK (smart00248)