myRT

myRT report for GCA_002565615.1_ASM256561v1

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Seq: NUXM01000017.1 Bacillus cereus strain AFS080604 AFS080604_106_E2_Contig17_140523, whole genome shotgun sequence (46622 bp)
Overview 1 RT 1: 19393-23078 bp Neighborhood of RT #1 [19393, 23107] DDE_Tnp_1 RVT-GII GIIM DUF3784 Feature: gene Location: 19393-20451 bp Feature: domain Description: DDE_Tnp_1 Location: 19750-20437 bp Feature: domain Description: DDE_Tnp_1 Location: 1 9750-20437 bp Feature: gene Location: 20527-20721 bp Feature: gene Location: 20738-22045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21023-21662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 023-21 662 bp Feature: domain Description: GIIM Note: maturase Location: 21737-21962 bp Feature: domain Description: GIIM Note: maturase Location: 21 737-21 962 bp Feature: gene Location: 22312-22740 bp Feature: gene Location: 22775-23107 bp Feature: domain Description: DUF3784 Location: 22832-23078 bp Feature: domain Description: DUF3784 Location: 22832-23078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), DUF3784 (pfam12650)

Seq: NUXM01000045.1 Bacillus cereus strain AFS080604 AFS080604_106_E2_Contig45_140523, whole genome shotgun sequence (49044 bp)
Overview 1 RT 1: 19804-28137 bp Neighborhood of RT #1 [19804, 28394] RVT-UG8 RVT-UG3 HNH_4 COG3950 restrict_AAA_1 Feature: gene Location: 19804-20442 bp Feature: gene Location: 20684-21070 bp Feature: gene Location: 21157-23169 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 21673-22117 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 1673-2 2 117 bp Feature: gene Location: 23267-24520 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 23519-23972 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 3519-2 3972 bp Feature: gene Location: 25147-26421 bp Feature: domain Description: HNH_4 Location: 25822-25990 bp Feature: domain Description: HNH_4 Location: 2 582 2 -2 5990 bp Feature: gene Location: 26418-28394 bp Feature: domain Description: COG3950 Location: 26586-26763 bp Feature: domain Description: COG3950 Location: 2 6586-2 6763 bp Feature: domain Description: restrict_AAA_1 Location: 27804-28137 bp Feature: domain Description: restrict_AAA_1 Location: 2 7804-2 8137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, HNH_4 (pfam13395), COG3950 (Predicted ATP-binding protein involved in virulence ), restrict_AAA_1 (TIGR04435)