myRT

myRT report for GCA_002565815.1_ASM256581v1

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Seq: NUYN01000013.1 Bacillus cereus strain AFS076905 AFS076905_98_B5_Contig13_140514, whole genome shotgun sequence (250389 bp)
Overview 1 RT 1: 220577-226402 bp Neighborhood of RT #1 [220577, 226425] PRK00148 RadC RVT-GII Intron_maturas2 HNHc PRK13927 PRK13922 Feature: gene Location: 220577-221152 bp Feature: domain Description: PRK00148 Location: 220586-221147 bp Feature: domain Description: PRK001 48 Location: 220586-221 1 47 bp Feature: gene Location: 221199-221684 bp Feature: domain Description: RadC Location: 221211-221679 bp Feature: domain Description: RadC Location: 221 21 1 -221 679 bp Feature: gene Location: 222237-224048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222501-223332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222501 -223332 bp Feature: domain Description: Intron_maturas2 Location: 223413-223758 bp Feature: domain Description: Intron_maturas2 Location: 22341 3-223758 bp Feature: domain Description: HNHc Note: nucleases Location: 223863-224019 bp Feature: domain Description: HNHc Note: nucleases Location: 223863-22401 9 bp Feature: gene Location: 224513-225532 bp Feature: domain Description: PRK13927 Location: 224531-225521 bp Feature: domain Description: PRK1 3927 Location: 224531 -225521 bp Feature: gene Location: 225574-226425 bp Feature: domain Description: PRK13922 Location: 225577-226402 bp Feature: domain Description: PRK1 3922 Location: 225577-226402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00148 (Maf-like protein; Reviewed), RadC (pfam04002), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: NUYN01000036.1 Bacillus cereus strain AFS076905 AFS076905_98_B5_Contig36_140514, whole genome shotgun sequence (46115 bp)
Overview 1 RT 1: 20738-25329 bp Neighborhood of RT #1 [20738, 25329] OmpR Hfq RVT-UG2 SASP Feature: gene Location: 20738-21403 bp Feature: domain Description: OmpR Location: 20753-21398 bp Feature: domain Description: OmpR Location: 2 0753-2 1398 bp Feature: gene Location: 21828-21986 bp Feature: domain Description: Hfq Location: 21840-21960 bp Feature: domain Description: Hfq Location: 2 1840-2 1960 bp Feature: gene Location: 22570-23979 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 22846-23683 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 2 846-2 3683 bp Feature: gene Location: 24174-24386 bp Feature: domain Description: SASP Location: 24204-24366 bp Feature: domain Description: SASP Location: 2 42 04-2 4366 bp Feature: gene Location: 25078-25329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), Hfq (TIGR02383), RVT-UG2, SASP (pfam00269)

Seq: NUYN01000046.1 Bacillus cereus strain AFS076905 AFS076905_98_B5_Contig46_140514, whole genome shotgun sequence (482 bp)
Overview 1 RT 1: 59-320 bp Neighborhood of RT #1 [59, 481] RVT-UG11 Feature: gene Location: 59-481 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 128-320 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 128-3 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11

Seq: NUYN01000063.1 Bacillus cereus strain AFS076905 AFS076905_98_B5_Contig63_140514, whole genome shotgun sequence (1941 bp)
Overview 1 RT 1: 151-1401 bp Neighborhood of RT #1 [151, 1421] group_II_RT_mat RVT-GII Feature: gene Location: 151-558 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 175-478 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 175-4 78 bp Feature: gene Location: 558-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864 -14 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII