myRT

myRT report for GCA_002566215.1_ASM256621v1

Download annotations/find similar RTs

Seq: NUWJ01000134.1 Bacillus cereus strain AFS083741 AFS083741_104_C12_Contig134_140523, whole genome shotgun sequence (8649 bp)
Overview 1 RT 1: 1-6638 bp Neighborhood of RT #1 [1, 6703] Hfq RVT-GII GIIM HNHc Rve RVT_N RVT-GII COG3547 Feature: gene Location: 1-531 bp Feature: gene Location: 710-943 bp Feature: domain Description: Hfq Location: 764-938 bp Feature: domain Description: Hfq Location: 764-938 bp Feature: gene Location: 1301-2950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1358-2093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 358-2093 bp Feature: domain Description: GIIM Note: maturase Location: 2183-2390 bp Feature: domain Description: GIIM Note: maturase Location: 21 83-2390 bp Feature: domain Description: HNHc Note: nucleases Location: 2702-2867 bp Feature: domain Description: HNHc Note: nucleases Location: 2702-2867 bp Feature: gene Location: 3190-3669 bp Feature: domain Description: Rve Location: 3196-3634 bp Feature: domain Description: Rve Location: 31 96-3634 bp Feature: gene Location: 3695-4642 bp Feature: RT Description: RVT_N Location: 3743-3989 bp Feature: RT Description: RVT_N Location: 3743-3989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4043-4619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4043-461 9 bp Feature: gene Location: 4690-4893 bp Feature: gene Location: 5558-6703 bp Feature: domain Description: COG3547 Location: 5711-6638 bp Feature: domain Description: COG3547 Location: 571 1 -6638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), Hfq (TIGR02383), Rve (COG3316), COG3547 (Transposase )

Seq: NUWJ01000208.1 Bacillus cereus strain AFS083741 AFS083741_104_C12_Contig208_140523, whole genome shotgun sequence (2514 bp)
Overview 1 RT 1: 2-2381 bp Neighborhood of RT #1 [2, 2407] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-172 bp Feature: gene Location: 599-2407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1688 bp Feature: domain Description: Intron_maturas2 Location: 1760-2096 bp Feature: domain Description: Intron_maturas2 Location: 1760-2 096 bp Feature: domain Description: HNHc Note: nucleases Location: 2234-2381 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 34-2 381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUWJ01000027.1 Bacillus cereus strain AFS083741 AFS083741_104_C12_Contig27_140523, whole genome shotgun sequence (2784 bp)
Overview 1 RT 1: 140-1877 bp Neighborhood of RT #1 [140, 1969] RVT-GII HNHc Feature: gene Location: 140-1969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-1091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 77-1091 bp Feature: domain Description: HNHc Note: nucleases Location: 1706-1877 bp Feature: domain Description: HNHc Note: nucleases Location: 1706-1877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUWJ01000044.1 Bacillus cereus strain AFS083741 AFS083741_104_C12_Contig44_140523, whole genome shotgun sequence (4240 bp)
Overview 1 RT 1: 1-3769 bp Neighborhood of RT #1 [1, 3769] Rve HTH_3 RVT-GII GIIM Feature: gene Location: 1-420 bp Feature: domain Description: Rve Location: 7-391 bp Feature: domain Description: Rve Location: 7-391 bp Feature: gene Location: 716-937 bp Feature: domain Description: HTH_3 Location: 746-893 bp Feature: domain Description: HTH_3 Location: 74 6-893 bp Feature: gene Location: 1719-2978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001-2640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001-264 0 bp Feature: domain Description: GIIM Note: maturase Location: 2715-2940 bp Feature: domain Description: GIIM Note: maturase Location: 2715-294 0 bp Feature: gene Location: 3012-3155 bp Feature: gene Location: 3590-3769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), HTH_3 (pfam01381)