myRT

myRT report for GCA_002566525.1_ASM256652v1

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Seq: NUXS01000010.1 Bacillus cereus strain AFS079629 AFS079629_100_A5_Contig10_140514, whole genome shotgun sequence (46977 bp)
Overview 1 RT 1: 155-7528 bp Neighborhood of RT #1 [155, 7528] HTH_XRE TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 155-715 bp Feature: domain Description: HTH_XRE Location: 167-338 bp Feature: domain Description: HTH_XRE Location: 1 67-338 bp Feature: gene Location: 968-2992 bp Feature: domain Description: TraG-D_C Location: 1109-1469 bp Feature: domain Description: TraG-D_C Location: 1 1 09-1 469 bp Feature: domain Description: Ftsk_gamma Location: 1874-2054 bp Feature: domain Description: Ftsk_gamma Location: 1 874-2054 bp Feature: domain Description: Ftsk_gamma Location: 2186-2318 bp Feature: domain Description: Ftsk_gamma Location: 21 86-231 8 bp Feature: gene Location: 3096-4805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3258-4083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3258-4083 bp Feature: domain Description: Intron_maturas2 Location: 4164-4455 bp Feature: domain Description: Intron_maturas2 Location: 41 64-4455 bp Feature: domain Description: HNHc Note: nucleases Location: 4602-4779 bp Feature: domain Description: HNHc Note: nucleases Location: 4602-4779 bp Feature: gene Location: 5499-7010 bp Feature: gene Location: 7028-7528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUXS01000131.1 Bacillus cereus strain AFS079629 AFS079629_100_A5_Contig131_140514, whole genome shotgun sequence (299 bp)
Overview 1 RT 1: 3-285 bp Neighborhood of RT #1 [3, 296] RVT-GII Feature: gene Location: 3-296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-2 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUXS01000004.1 Bacillus cereus strain AFS079629 AFS079629_100_A5_Contig4_140514, whole genome shotgun sequence (682400 bp)
Overview 1 RT 1: 132443-140201 bp Neighborhood of RT #1 [132443, 140215] RimP polC RVT-GII HNHc polC Feature: gene Location: 132443-132913 bp Feature: domain Description: RimP Location: 132449-132911 bp Feature: domain Description: RimP Location: 13 2449-13 2911 bp Feature: gene Location: 133247-134686 bp Feature: domain Description: polC Location: 133280-134684 bp Feature: domain Description: polC Location: 13 3 280-13 4684 bp Feature: gene Location: 134760-136586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135066-135762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 5066-13 5762 bp Feature: domain Description: HNHc Note: nucleases Location: 136317-136467 bp Feature: domain Description: HNHc Note: nucleases Location: 13 63 17-13 6467 bp Feature: gene Location: 136751-137014 bp Feature: gene Location: 137303-140215 bp Feature: domain Description: polC Location: 137321-140201 bp Feature: domain Description: polC Location: 13 73 21-140201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimP (COG0779), polC (TIGR00354), RVT-GII, HNHc (smart00507)

Seq: NUXS01000008.1 Bacillus cereus strain AFS079629 AFS079629_100_A5_Contig8_140514, whole genome shotgun sequence (79531 bp)
Overview 1 RT 1: 12899-18292 bp Neighborhood of RT #1 [12899, 18465] 7tmA_mAChR_M4 RVT-Retrons DUF262 Feature: gene Location: 12899-13792 bp Feature: domain Description: 7tmA_mAChR_M4 Location: 13016-13589 bp Feature: domain Description: 7tmA_mAChR_M4 Location: 13016-13589 bp Feature: gene Location: 13974-14171 bp Feature: gene Location: 14198-15919 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14324-14930 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14 324 -14 930 bp Feature: gene Location: 16212-17279 bp Feature: gene Location: 17281-18465 bp Feature: domain Description: DUF262 Location: 17443-18292 bp Feature: domain Description: DUF262 Location: 174 4 3-18292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 7tmA_mAChR_M4 (cd15298), RVT-Retrons, DUF262 (pfam03235)