myRT

myRT report for GCA_002566555.1_ASM256655v1

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Seq: NUYG01000121.1 Bacillus thuringiensis strain AFS077661 AFS077661_120_D5_Contig121_140618, whole genome shotgun sequence (5034 bp)
Overview 1 RT 1: 392-2051 bp Neighborhood of RT #1 [392, 2051] RVT-GII GIIM Feature: gene Location: 392-1462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-1 079 bp Feature: domain Description: GIIM Note: maturase Location: 1154-1379 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 54-1 379 bp Feature: gene Location: 1507-1722 bp Feature: gene Location: 1872-2051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NUYG01000001.1 Bacillus thuringiensis strain AFS077661 AFS077661_120_D5_Contig1_140618, whole genome shotgun sequence (97048 bp)
Overview 1 RT 1: 61835-70524 bp Neighborhood of RT #1 [61835, 70583] TrbL CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 61835-65854 bp Feature: domain Description: TrbL Location: 62126-62612 bp Feature: domain Description: TrbL Location: 62 12 6-62 612 bp Feature: gene Location: 65851-67155 bp Feature: domain Description: CwlT_like Location: 66703-67144 bp Feature: domain Description: CwlT_like Location: 66703-67144 bp Feature: gene Location: 67731-69554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67995-68829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67995-6882 9 bp Feature: domain Description: Intron_maturas2 Location: 68898-69237 bp Feature: domain Description: Intron_maturas2 Location: 68898-692 37 bp Feature: domain Description: HNHc Note: nucleases Location: 69375-69531 bp Feature: domain Description: HNHc Note: nucleases Location: 69375-69531 bp Feature: gene Location: 69556-69690 bp Feature: gene Location: 69714-70583 bp Feature: domain Description: NlpD Location: 69729-70152 bp Feature: domain Description: NlpD Location: 6972 9-70152 bp Feature: domain Description: Spr Location: 70188-70524 bp Feature: domain Description: Spr Location: 70188-7052 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), CwlT_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: NUYG01000027.1 Bacillus thuringiensis strain AFS077661 AFS077661_120_D5_Contig27_140618, whole genome shotgun sequence (192639 bp)
Overview 1 RT 1: 110515-118343 bp Neighborhood of RT #1 [110515, 118348] SR_ResInv HTH_49 RVT-UG8 RVT-UG17 NatB YhaQ Feature: gene Location: 110515-111102 bp Feature: domain Description: SR_ResInv Location: 110521-110893 bp Feature: domain Description: SR_ResInv Location: 110521-110893 bp Feature: domain Description: HTH_49 Location: 110968-111052 bp Feature: domain Description: HTH_49 Location: 110968-111052 bp Feature: gene Location: 111245-111379 bp Feature: gene Location: 112034-113965 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 112553-112985 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 112553 -112985 bp Feature: gene Location: 114198-115553 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 114501-114987 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 114501-114987 bp Feature: gene Location: 116215-117411 bp Feature: domain Description: NatB Location: 116227-117394 bp Feature: domain Description: NatB Location: 116227-1173 94 bp Feature: gene Location: 117449-118348 bp Feature: domain Description: YhaQ Location: 117452-118343 bp Feature: domain Description: YhaQ Location: 117452-1183 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), HTH_49 (pfam18010), RVT-UG8, RVT-UG17, NatB (COG1668), YhaQ (COG4152)

Seq: NUYG01000071.1 Bacillus thuringiensis strain AFS077661 AFS077661_120_D5_Contig71_140618, whole genome shotgun sequence (27051 bp)
Overview 1 RT 1: 15506-19329 bp Neighborhood of RT #1 [15506, 19329] RVT-GII Feature: gene Location: 15506-15754 bp Feature: gene Location: 16657-16911 bp Feature: gene Location: 16908-18188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17229-17964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17229-17964 bp Feature: gene Location: 18197-18640 bp Feature: gene Location: 18829-19329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII