myRT

myRT report for GCA_002566595.1_ASM256659v1

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Seq: NUYK01000011.1 Bacillus cereus strain AFS077312 AFS077312_108_F1_Contig11_140523, whole genome shotgun sequence (83952 bp)
Overview 1 RT 1: 18240-24744 bp 2 RT 2: 39353-46153 bp Neighborhood of RT #1 [18240, 24744] TraG-D_C Ftsk_gamma Ftsk_gamma KOG4768 RVT-GII Neighborhood of RT #2 [39353, 46173] RVT-GII HNHc DUF3854 T_den_put_tspse Feature: gene Location: 18240-20213 bp Feature: domain Description: TraG-D_C Location: 18381-18741 bp Feature: domain Description: TraG-D_C Location: 1 8381 -1 8741 bp Feature: domain Description: Ftsk_gamma Location: 19149-19326 bp Feature: domain Description: Ftsk_gamma Location: 1 91 49-1 9326 bp Feature: domain Description: Ftsk_gamma Location: 19458-19593 bp Feature: domain Description: Ftsk_gamma Location: 1 9458-1 9593 bp Feature: gene Location: 20317-20742 bp Feature: domain Description: KOG4768 Location: 20323-20737 bp Feature: domain Description: KOG4768 Location: 20323-20737 bp Feature: gene Location: 20963-22123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21233-22058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 233-22058 bp Feature: gene Location: 22715-24226 bp Feature: gene Location: 24244-24744 bp Feature: gene Location: 39353-39631 bp Feature: gene Location: 41011-41487 bp Feature: gene Location: 42277-44160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42598-43336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42598-43336 bp Feature: domain Description: HNHc Note: nucleases Location: 43894-44041 bp Feature: domain Description: HNHc Note: nucleases Location: 43894-44041 bp Feature: gene Location: 44239-45162 bp Feature: domain Description: DUF3854 Location: 44791-45133 bp Feature: domain Description: DUF3854 Location: 44791 -451 33 bp Feature: gene Location: 45274-46173 bp Feature: domain Description: T_den_put_tspse Location: 45316-46153 bp Feature: domain Description: T_den_put_tspse Location: 4531 6-461 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, HNHc (smart00507), DUF3854 (pfam12965), T_den_put_tspse (TIGR01784)

Seq: NUYK01000018.1 Bacillus cereus strain AFS077312 AFS077312_108_F1_Contig18_140523, whole genome shotgun sequence (113689 bp)
Overview 1 RT 1: 88868-95442 bp Neighborhood of RT #1 [88868, 95442] COG4127 COG4127 RVT-Retrons AAA_15 Feature: gene Location: 88868-89356 bp Feature: domain Description: COG4127 Location: 88874-89348 bp Feature: domain Description: COG412 7 Location: 88874-89348 bp Feature: gene Location: 89412-89627 bp Feature: domain Description: COG4127 Location: 89421-89598 bp Feature: domain Description: COG412 7 Location: 8942 1-89598 bp Feature: gene Location: 90268-91308 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90394-90961 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90394-90961 bp Feature: gene Location: 91479-93485 bp Feature: domain Description: AAA_15 Location: 91482-92436 bp Feature: domain Description: AAA_15 Location: 91482 -92 436 bp Feature: gene Location: 93820-95442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), RVT-Retrons, AAA_15 (pfam13175)

Seq: NUYK01000020.1 Bacillus cereus strain AFS077312 AFS077312_108_F1_Contig20_140523, whole genome shotgun sequence (43093 bp)
Overview 1 RT 1: 28670-32634 bp Neighborhood of RT #1 [28670, 32634] HTH_ARSR PRK03113 RVT-GII HNHc Feature: gene Location: 28670-28963 bp Feature: domain Description: HTH_ARSR Location: 28733-28946 bp Feature: domain Description: HTH_ARSR Location: 2873 3 -28946 bp Feature: gene Location: 29037-29474 bp Feature: domain Description: PRK03113 Location: 29052-29427 bp Feature: domain Description: PRK03 113 Location: 29052-29427 bp Feature: gene Location: 29714-31366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29759-30470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29759-3 0470 bp Feature: domain Description: HNHc Note: nucleases Location: 31061-31211 bp Feature: domain Description: HNHc Note: nucleases Location: 3 1061-3 1211 bp Feature: gene Location: 32166-32357 bp Feature: gene Location: 32431-32634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), PRK03113 (putative disulfide oxidoreductase; Provisional), RVT-GII, HNHc (smart00507)