myRT

myRT report for GCA_002566755.1_ASM256675v1

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Seq: NUZI01000038.1 Bacillus cereus strain AFS074868 AFS074868_102_C4_Contig38_140514, whole genome shotgun sequence (102862 bp)
Overview 1 RT 1: 17212-24427 bp Neighborhood of RT #1 [17212, 24483] AbiJ_NTD4 COG4637 YbjD RVT-Retrons INT_ICEBs1_C_like Feature: gene Location: 17212-18051 bp Feature: domain Description: AbiJ_NTD4 Location: 17218-17653 bp Feature: domain Description: AbiJ_NTD4 Location: 1 721 8-1 7653 bp Feature: gene Location: 18918-20861 bp Feature: domain Description: COG4637 Location: 18936-19092 bp Feature: domain Description: COG4637 Location: 1 8936-1 9092 bp Feature: domain Description: YbjD Location: 19605-20295 bp Feature: domain Description: YbjD Location: 1 9605-20295 bp Feature: gene Location: 21136-22095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21187-21742 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 1 87-21 742 bp Feature: gene Location: 23050-23907 bp Feature: gene Location: 24142-24483 bp Feature: domain Description: INT_ICEBs1_C_like Location: 24148-24427 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 241 48-24427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiJ_NTD4 (pfam18863), COG4637 (Predicted ATPase ), YbjD (COG3593), RVT-Retrons, INT_ICEBs1_C_like (cd01189)

Seq: NUZI01000039.1 Bacillus cereus strain AFS074868 AFS074868_102_C4_Contig39_140514, whole genome shotgun sequence (43338 bp)
Overview 1 RT 1: 12002-19517 bp Neighborhood of RT #1 [12002, 19696] RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 12002-12475 bp Feature: gene Location: 12493-14004 bp Feature: gene Location: 14704-16413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14866-15688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14866-15688 bp Feature: domain Description: Intron_maturas2 Location: 15769-16063 bp Feature: domain Description: Intron_maturas2 Location: 15769-16063 bp Feature: domain Description: HNHc Note: nucleases Location: 16210-16384 bp Feature: domain Description: HNHc Note: nucleases Location: 162 10-16384 bp Feature: gene Location: 16607-18454 bp Feature: domain Description: TraG-D_C Location: 16658-17018 bp Feature: domain Description: TraG-D_C Location: 16658-17018 bp Feature: domain Description: Ftsk_gamma Location: 17444-17624 bp Feature: domain Description: Ftsk_gamma Location: 17444-1762 4 bp Feature: domain Description: Ftsk_gamma Location: 17777-17951 bp Feature: domain Description: Ftsk_gamma Location: 17777-17951 bp Feature: gene Location: 18713-19696 bp Feature: domain Description: rpsA Location: 18980-19517 bp Feature: domain Description: rpsA Location: 18980-19517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NUZI01000070.1 Bacillus cereus strain AFS074868 AFS074868_102_C4_Contig70_140514, whole genome shotgun sequence (22713 bp)
Overview 1 RT 1: 6190-14970 bp Neighborhood of RT #1 [6190, 15047] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 6190-10224 bp Feature: gene Location: 10255-11223 bp Feature: domain Description: TraC-F-type Location: 10282-11062 bp Feature: domain Description: TraC-F-type Location: 10282-11062 bp Feature: gene Location: 11515-13347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11815-12520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11815-12520 bp Feature: domain Description: HNHc Note: nucleases Location: 13099-13231 bp Feature: domain Description: HNHc Note: nucleases Location: 13 099-13 23 1 bp Feature: gene Location: 13641-13775 bp Feature: gene Location: 14076-15047 bp Feature: domain Description: TraC-F-type Location: 14496-14970 bp Feature: domain Description: TraC-F-type Location: 14496-14970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: NUZI01000072.1 Bacillus cereus strain AFS074868 AFS074868_102_C4_Contig72_140514, whole genome shotgun sequence (2017 bp)
Overview 1 RT 1: 191-1851 bp Neighborhood of RT #1 [191, 1851] RVT-GII GIIM Feature: gene Location: 191-1522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-1139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-1139 bp Feature: domain Description: GIIM Note: maturase Location: 1214-1439 bp Feature: domain Description: GIIM Note: maturase Location: 1214 -14 39 bp Feature: gene Location: 1672-1851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)