myRT

myRT report for GCA_002567585.1_ASM256758v1

Download annotations/find similar RTs

Seq: NVAT01000113.1 Bacillus thuringiensis strain AFS070359 AFS070359_119_D7_Contig135_140618, whole genome shotgun sequence (2536 bp)
Overview 1 RT 1: 628-2416 bp Neighborhood of RT #1 [628, 2445] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 628-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1 723 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: Intron_maturas2 Location: 1 801 -2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2416 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-241 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NVAT01000030.1 Bacillus thuringiensis strain AFS070359 AFS070359_119_D7_Contig30_140618, whole genome shotgun sequence (41205 bp)
Overview 1 RT 1: 8720-11967 bp Neighborhood of RT #1 [8720, 11975] PRK06760 RVT-GII DDE_Tnp_1 Feature: gene Location: 8720-9424 bp Feature: domain Description: PRK06760 Location: 8726-9404 bp Feature: domain Description: PRK06760 Location: 872 6-9404 bp Feature: gene Location: 9441-9605 bp Feature: gene Location: 10518-10940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10521-10881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052 1-10881 bp Feature: gene Location: 11444-11689 bp Feature: gene Location: 11760-11975 bp Feature: domain Description: DDE_Tnp_1 Location: 11784-11967 bp Feature: domain Description: DDE_Tnp_1 Location: 11784-11967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06760 (hypothetical protein; Provisional), RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: NVAT01000054.1 Bacillus thuringiensis strain AFS070359 AFS070359_119_D7_Contig45_140618, whole genome shotgun sequence (30591 bp)
Overview 1 RT 1: 19597-28991 bp Neighborhood of RT #1 [19597, 28991] DEXDc RVT_N RVT-GII GIIM HNHc RVT-GII HNHc Feature: gene Location: 19597-22230 bp Feature: domain Description: DEXDc Location: 20425-21376 bp Feature: domain Description: DEXDc Location: 20425-213 76 bp Feature: gene Location: 22258-22488 bp Feature: gene Location: 22834-24642 bp Feature: domain Description: RVT_N Location: 22885-23125 bp Feature: domain Description: RVT_N Location: 22885-23 125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23185-23839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 185-23 83 9 bp Feature: domain Description: GIIM Note: maturase Location: 23902-24136 bp Feature: domain Description: GIIM Note: maturase Location: 23 902-2413 6 bp Feature: domain Description: HNHc Note: nucleases Location: 24349-24496 bp Feature: domain Description: HNHc Note: nucleases Location: 243 49-24496 bp Feature: gene Location: 25494-27392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25818-26556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25818-26556 bp Feature: domain Description: HNHc Note: nucleases Location: 27129-27282 bp Feature: domain Description: HNHc Note: nucleases Location: 27129-27282 bp Feature: gene Location: 27683-28261 bp Feature: gene Location: 28278-28991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NVAT01000068.1 Bacillus thuringiensis strain AFS070359 AFS070359_119_D7_Contig79_140618, whole genome shotgun sequence (103199 bp)
Overview 1 RT 1: 3654-12515 bp Neighborhood of RT #1 [3654, 12559] bZIP AE_Prim_S_like RVT-UG10 INT_ICEBs1_C_like Feature: gene Location: 3654-3833 bp Feature: domain Description: bZIP Location: 3690-3783 bp Feature: domain Description: bZIP Location: 3690-3783 bp Feature: gene Location: 4106-4285 bp Feature: gene Location: 5237-10876 bp Feature: domain Description: AE_Prim_S_like Location: 5384-5666 bp Feature: domain Description: AE_Prim_S_like Location: 5384 -5666 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 6653-7307 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 6653-7307 bp Feature: gene Location: 12156-12308 bp Feature: gene Location: 12368-12559 bp Feature: domain Description: INT_ICEBs1_C_like Location: 12374-12515 bp Feature: domain Description: INT_ICEBs1_C_like Location: 12374 -12515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bZIP (cl21462), AE_Prim_S_like (cl01287), RVT-UG10, INT_ICEBs1_C_like (cd01189)