myRT

myRT report for GCA_002567865.1_ASM256786v1

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Seq: NVBL01000100.1 Bacillus thuringiensis strain AFS067605 AFS067605_71_F7_Contig100_140411, whole genome shotgun sequence (2607 bp)
Overview 1 RT 1: 107-1772 bp Neighborhood of RT #1 [107, 1897] RVT-GII HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1 1 00 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1 640-1 772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NVBL01000040.1 Bacillus thuringiensis strain AFS067605 AFS067605_71_F7_Contig40_140411, whole genome shotgun sequence (37502 bp)
Overview 1 RT 1: 10984-16729 bp Neighborhood of RT #1 [10984, 17583] RVT_N RVT-GII GIIM HNHc DEXDc Feature: gene Location: 10984-11697 bp Feature: gene Location: 11714-12421 bp Feature: gene Location: 12538-14346 bp Feature: domain Description: RVT_N Location: 12589-12829 bp Feature: domain Description: RVT_N Location: 12 589-12 82 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12889-13543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 889-13543 bp Feature: domain Description: GIIM Note: maturase Location: 13606-13840 bp Feature: domain Description: GIIM Note: maturase Location: 13606-13840 bp Feature: domain Description: HNHc Note: nucleases Location: 14053-14200 bp Feature: domain Description: HNHc Note: nucleases Location: 14053-142 00 bp Feature: gene Location: 14692-14922 bp Feature: gene Location: 14950-17583 bp Feature: domain Description: DEXDc Location: 15778-16729 bp Feature: domain Description: DEXDc Location: 15778-1672 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXDc (smart00487)

Seq: NVBL01000043.1 Bacillus thuringiensis strain AFS067605 AFS067605_71_F7_Contig43_140411, whole genome shotgun sequence (60224 bp)
Overview 1 RT 1: 48255-51481 bp Neighborhood of RT #1 [48255, 51501] DDE_Tnp_1 RVT-GII PRK06760 Feature: gene Location: 48255-48470 bp Feature: domain Description: DDE_Tnp_1 Location: 48279-48462 bp Feature: domain Description: DDE_Tnp_1 Location: 48279-48462 bp Feature: gene Location: 48529-48786 bp Feature: gene Location: 49290-49712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49293-49638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49293 -4963 8 bp Feature: gene Location: 50625-50789 bp Feature: gene Location: 50806-51501 bp Feature: domain Description: PRK06760 Location: 50809-51481 bp Feature: domain Description: PRK06760 Location: 50809-51481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, PRK06760 (hypothetical protein; Provisional)

Seq: NVBL01000004.1 Bacillus thuringiensis strain AFS067605 AFS067605_71_F7_Contig4_140411, whole genome shotgun sequence (244147 bp)
Overview 1 RT 1: 23184-29269 bp Neighborhood of RT #1 [23184, 29274] PRK13922 PRK13927 RVT-GII HNHc PRK00024 PRK00148 Feature: gene Location: 23184-24035 bp Feature: domain Description: PRK13922 Location: 23187-24015 bp Feature: domain Description: PRK13922 Location: 23187-24 015 bp Feature: gene Location: 24077-25096 bp Feature: domain Description: PRK13927 Location: 24095-25085 bp Feature: domain Description: PRK13927 Location: 24 095-25085 bp Feature: gene Location: 25418-27289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25739-26447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25739-264 4 7 bp Feature: domain Description: HNHc Note: nucleases Location: 27041-27209 bp Feature: domain Description: HNHc Note: nucleases Location: 2704 1-27209 bp Feature: gene Location: 27990-28631 bp Feature: domain Description: PRK00024 Location: 28002-28617 bp Feature: domain Description: PRK00024 Location: 28002-28617 bp Feature: gene Location: 28678-29274 bp Feature: domain Description: PRK00148 Location: 28708-29269 bp Feature: domain Description: PRK0014 8 Location: 28708-29269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), PRK00024 (DNA repair protein RadC), PRK00148 (Maf-like protein; Reviewed)

Seq: NVBL01000091.1 Bacillus thuringiensis strain AFS067605 AFS067605_71_F7_Contig91_140411, whole genome shotgun sequence (2493 bp)
Overview 1 RT 1: 628-2416 bp Neighborhood of RT #1 [628, 2445] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 628-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1720 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2416 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)