myRT

myRT report for GCA_002567875.1_ASM256787v1

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Seq: NVBT01000013.1 Bacillus thuringiensis strain AFS066710 AFS066710_120_H3_Contig13_140618, whole genome shotgun sequence (139781 bp)
Overview 1 RT 1: 110504-116555 bp Neighborhood of RT #1 [110504, 116791] RapH_N TPR_12 TPR DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 MATE_Wzx_like Feature: gene Location: 110504-111577 bp Feature: domain Description: RapH_N Location: 110522-110699 bp Feature: domain Description: RapH_N Location: 1 1 0522-1 1 0699 bp Feature: domain Description: TPR_12 Location: 110909-111104 bp Feature: domain Description: TPR_1 2 Location: 1 1 0909-1 1 1 1 04 bp Feature: domain Description: TPR Location: 111146-111536 bp Feature: domain Description: TPR Location: 1 1 1 1 46-1 1 1 536 bp Feature: gene Location: 111841-112224 bp Feature: domain Description: DDE_Tnp_1 Location: 111847-111949 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 1 847-1 1 1 949 bp Feature: gene Location: 112374-113678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112659-113298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2659-1 1 3298 bp Feature: domain Description: GIIM Note: maturase Location: 113373-113598 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 3373-1 1 3598 bp Feature: gene Location: 114183-115241 bp Feature: domain Description: DDE_Tnp_1 Location: 114540-115227 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 4540-1 1 5227 bp Feature: gene Location: 115355-116791 bp Feature: domain Description: MATE_Wzx_like Location: 115373-116555 bp Feature: domain Description: MATE_Wzx_like Location: 1 1 5373-1 1 6555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR_12 (pfam13424), TPR (smart00028), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), MATE_Wzx_like (cd13128)

Seq: NVBT01000016.1 Bacillus thuringiensis strain AFS066710 AFS066710_120_H3_Contig16_140618, whole genome shotgun sequence (141429 bp)
Overview 1 RT 1: 23690-29778 bp Neighborhood of RT #1 [23690, 29783] PRK13922 PRK13927 RVT-GII HNHc PRK00024 PRK00148 Feature: gene Location: 23690-24541 bp Feature: domain Description: PRK13922 Location: 23693-24521 bp Feature: domain Description: PRK1392 2 Location: 2 3693-2 452 1 bp Feature: gene Location: 24583-25602 bp Feature: domain Description: PRK13927 Location: 24601-25591 bp Feature: domain Description: PRK1392 7 Location: 2 4601-2 5591 bp Feature: gene Location: 25924-27798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26245-26956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 45-2 6956 bp Feature: domain Description: HNHc Note: nucleases Location: 27550-27718 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7550-2 7718 bp Feature: gene Location: 28499-29140 bp Feature: domain Description: PRK00024 Location: 28511-29126 bp Feature: domain Description: PRK0002 4 Location: 2 8511-2 912 6 bp Feature: gene Location: 29187-29783 bp Feature: domain Description: PRK00148 Location: 29217-29778 bp Feature: domain Description: PRK00148 Location: 2 92 17-2 9778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), PRK00024 (DNA repair protein RadC), PRK00148 (Maf-like protein; Reviewed)