myRT

myRT report for GCA_002568285.1_ASM256828v1

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Seq: NVCK01000041.1 Bacillus thuringiensis strain AFS065666 AFS065666_107_B3_Contig41_140523, whole genome shotgun sequence (52634 bp)
Overview 1 RT 1: 15755-22946 bp Neighborhood of RT #1 [15755, 23125] RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma rpsA Feature: gene Location: 15755-16228 bp Feature: gene Location: 16246-17757 bp Feature: gene Location: 18349-20166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18619-19441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 861 9-1 9441 bp Feature: domain Description: Intron_maturas2 Location: 19522-19816 bp Feature: domain Description: Intron_maturas2 Location: 1 9522-1 981 6 bp Feature: domain Description: HNHc Note: nucleases Location: 19963-20137 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9963-201 37 bp Feature: gene Location: 20360-21883 bp Feature: domain Description: TraG-D_C Location: 20411-20771 bp Feature: domain Description: TraG-D_C Location: 2041 1 -20771 bp Feature: domain Description: Ftsk_gamma Location: 21206-21365 bp Feature: domain Description: Ftsk_gamma Location: 21 206-21 365 bp Feature: gene Location: 22142-23125 bp Feature: domain Description: rpsA Location: 22409-22946 bp Feature: domain Description: rpsA Location: 22409-22946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NVCK01000050.1 Bacillus thuringiensis strain AFS065666 AFS065666_107_B3_Contig50_140523, whole genome shotgun sequence (32412 bp)
Overview 1 RT 1: 5412-9136 bp Neighborhood of RT #1 [5412, 9136] RVT-GII RVT-GII GIIM Peptidases_S8_Subtilisin_subset Feature: gene Location: 5412-5681 bp Feature: gene Location: 5703-5855 bp Feature: gene Location: 5991-6257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6009-6228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6009-62 2 8 bp Feature: gene Location: 6332-7000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6338-6638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6338-6638 bp Feature: domain Description: GIIM Note: maturase Location: 6719-6947 bp Feature: domain Description: GIIM Note: maturase Location: 6719-6947 bp Feature: gene Location: 7364-8335 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 7583-8231 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 7583-82 31 bp Feature: gene Location: 8351-9136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Peptidases_S8_Subtilisin_subset (cd07477)

Seq: NVCK01000005.1 Bacillus thuringiensis strain AFS065666 AFS065666_107_B3_Contig5_140523, whole genome shotgun sequence (605944 bp)
Overview 1 RT 1: 189743-195014 bp Neighborhood of RT #1 [189743, 195025] PRK01658 nuc_hydro RVT-Retrons PinE Feature: gene Location: 189743-190120 bp Feature: domain Description: PRK01658 Location: 189755-190115 bp Feature: domain Description: PRK01658 Location: 189755-190115 bp Feature: gene Location: 190383-191414 bp Feature: domain Description: nuc_hydro Location: 190479-191385 bp Feature: domain Description: nuc_hydro Location: 190479-1913 85 bp Feature: gene Location: 191851-192960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 192007-192568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 192007-192568 bp Feature: gene Location: 193142-194059 bp Feature: gene Location: 194390-195025 bp Feature: domain Description: PinE Location: 194435-195014 bp Feature: domain Description: PinE Location: 19443 5-195014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01658 (CidA/LrgA family holin-like protein), nuc_hydro (cl00226), RVT-Retrons, PinE (COG1961)