myRT

myRT report for GCA_002568345.1_ASM256834v1

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Seq: NVCV01000001.1 Bacillus thuringiensis strain AFS063894 AFS063894_71_E9_Contig1_140411, whole genome shotgun sequence (60256 bp)
Overview 1 RT 1: 8721-11962 bp Neighborhood of RT #1 [8721, 11970] PRK06760 RVT-GII DDE_Tnp_1 Feature: gene Location: 8721-9419 bp Feature: domain Description: PRK06760 Location: 8727-9399 bp Feature: domain Description: PRK06760 Location: 8727-9399 bp Feature: gene Location: 9436-9600 bp Feature: gene Location: 10513-10935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10516-10861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 051 6-1 0861 bp Feature: gene Location: 11439-11684 bp Feature: gene Location: 11755-11970 bp Feature: domain Description: DDE_Tnp_1 Location: 11779-11962 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 779-1 1 962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06760 (hypothetical protein; Provisional), RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: NVCV01000021.1 Bacillus thuringiensis strain AFS063894 AFS063894_71_E9_Contig21_140411, whole genome shotgun sequence (243908 bp)
Overview 1 RT 1: 23184-29269 bp Neighborhood of RT #1 [23184, 29274] PRK13922 PRK13927 RVT-GII HNHc PRK00024 PRK00148 Feature: gene Location: 23184-24035 bp Feature: domain Description: PRK13922 Location: 23187-24015 bp Feature: domain Description: PRK1392 2 Location: 2 3187-2 4015 bp Feature: gene Location: 24077-25096 bp Feature: domain Description: PRK13927 Location: 24095-25085 bp Feature: domain Description: PRK1392 7 Location: 2 4095-2 5085 bp Feature: gene Location: 25418-27289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25739-26447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5739-2 6447 bp Feature: domain Description: HNHc Note: nucleases Location: 27041-27209 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7041-2 72 09 bp Feature: gene Location: 27990-28631 bp Feature: domain Description: PRK00024 Location: 28002-28617 bp Feature: domain Description: PRK0002 4 Location: 2 8002 -2 8617 bp Feature: gene Location: 28678-29274 bp Feature: domain Description: PRK00148 Location: 28708-29269 bp Feature: domain Description: PRK00148 Location: 2 8708-2 92 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), PRK00024 (DNA repair protein RadC), PRK00148 (Maf-like protein; Reviewed)

Seq: NVCV01000041.1 Bacillus thuringiensis strain AFS063894 AFS063894_71_E9_Contig41_140411, whole genome shotgun sequence (60967 bp)
Overview 1 RT 1: 41538-48388 bp Neighborhood of RT #1 [41538, 48388] DEXDc RVT_N RVT-GII GIIM HNHc Feature: gene Location: 41538-41765 bp Feature: gene Location: 41789-44422 bp Feature: domain Description: DEXDc Location: 42617-43568 bp Feature: domain Description: DEXDc Location: 42617-43 568 bp Feature: gene Location: 45026-46834 bp Feature: domain Description: RVT_N Location: 45077-45317 bp Feature: domain Description: RVT_N Location: 45077-453 17 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45377-46031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 77-4603 1 bp Feature: domain Description: GIIM Note: maturase Location: 46094-46328 bp Feature: domain Description: GIIM Note: maturase Location: 46094-463 28 bp Feature: domain Description: HNHc Note: nucleases Location: 46541-46688 bp Feature: domain Description: HNHc Note: nucleases Location: 46541-46688 bp Feature: gene Location: 46951-47658 bp Feature: gene Location: 47675-48388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NVCV01000079.1 Bacillus thuringiensis strain AFS063894 AFS063894_71_E9_Contig79_140411, whole genome shotgun sequence (2607 bp)
Overview 1 RT 1: 711-2376 bp Neighborhood of RT #1 [711, 2501] RVT-GII HNHc Feature: gene Location: 711-2501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008-1704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008-1704 bp Feature: domain Description: HNHc Note: nucleases Location: 2244-2376 bp Feature: domain Description: HNHc Note: nucleases Location: 224 4 -2376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NVCV01000087.1 Bacillus thuringiensis strain AFS063894 AFS063894_71_E9_Contig87_140411, whole genome shotgun sequence (2493 bp)
Overview 1 RT 1: 49-1837 bp Neighborhood of RT #1 [49, 1866] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 49-1866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-1141 bp Feature: domain Description: Intron_maturas2 Location: 1222-1516 bp Feature: domain Description: Intron_maturas2 Location: 1222-15 16 bp Feature: domain Description: HNHc Note: nucleases Location: 1663-1837 bp Feature: domain Description: HNHc Note: nucleases Location: 1663-1837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)