myRT

myRT report for GCA_002568585.1_ASM256858v1

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Seq: NVCO01000128.1 Bacillus thuringiensis strain AFS065400 AFS065400_104_A2_Contig128_140523, whole genome shotgun sequence (2934 bp)
Overview 1 RT 1: 1354-2871 bp Neighborhood of RT #1 [1354, 2933] DEDD_Tnp_IS110 RVT-GII Feature: gene Location: 1354-1551 bp Feature: gene Location: 1652-2473 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1667-2141 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 1 667-21 41 bp Feature: gene Location: 2727-2933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2751-2871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2751 -2871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), RVT-GII

Seq: NVCO01000006.1 Bacillus thuringiensis strain AFS065400 AFS065400_104_A2_Contig6_140523, whole genome shotgun sequence (47469 bp)
Overview 1 RT 1: 31230-38797 bp Neighborhood of RT #1 [31230, 38976] RVT-GII HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 31230-31703 bp Feature: gene Location: 31721-33025 bp Feature: gene Location: 33707-35497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34004-34700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34004-34700 bp Feature: domain Description: HNHc Note: nucleases Location: 35240-35372 bp Feature: domain Description: HNHc Note: nucleases Location: 352 40-35372 bp Feature: gene Location: 35563-37734 bp Feature: domain Description: TraG-D_C Location: 35938-36298 bp Feature: domain Description: TraG-D_C Location: 35938-362 98 bp Feature: domain Description: Ftsk_gamma Location: 36724-36904 bp Feature: domain Description: Ftsk_gamma Location: 3672 4-36904 bp Feature: domain Description: Ftsk_gamma Location: 37057-37201 bp Feature: domain Description: Ftsk_gamma Location: 37057-372 01 bp Feature: gene Location: 37993-38976 bp Feature: domain Description: rpsA Location: 38260-38797 bp Feature: domain Description: rpsA Location: 382 60-38797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NVCO01000089.1 Bacillus thuringiensis strain AFS065400 AFS065400_104_A2_Contig89_140523, whole genome shotgun sequence (44762 bp)
Overview 1 RT 1: 19010-24541 bp Neighborhood of RT #1 [19010, 24541] VirD4 RVT-GII RVT-GII HNHc TraG_VirD4 TraG_VirD4 Feature: gene Location: 19010-19606 bp Feature: domain Description: VirD4 Location: 19085-19592 bp Feature: domain Description: VirD4 Location: 19085-19592 bp Feature: gene Location: 19804-20037 bp Feature: gene Location: 20325-20750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20625-20748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20625-20748 bp Feature: gene Location: 20793-22154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20817-21327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20817-213 27 bp Feature: domain Description: HNHc Note: nucleases Location: 21906-22038 bp Feature: domain Description: HNHc Note: nucleases Location: 21906-2203 8 bp Feature: gene Location: 22274-24274 bp Feature: domain Description: TraG_VirD4 Location: 22301-22892 bp Feature: domain Description: TraG_VirD4 Location: 223 01-22892 bp Feature: domain Description: TraG_VirD4 Location: 22916-23609 bp Feature: domain Description: TraG_VirD4 Location: 22916-23 609 bp Feature: gene Location: 24290-24541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, HNHc (smart00507), TraG_VirD4