myRT

myRT report for GCA_002569095.1_ASM256909v1

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Seq: NVFE01000127.1 Bacillus toyonensis strain AFS086130 AFS086130_71_D6_Contig127_140411, whole genome shotgun sequence (18126 bp)
Overview 1 RT 1: 1722-14711 bp Neighborhood of RT #1 [1722, 14711] TcpE VirB4_CagE AAA_10 RVT-GII Intron_maturas2 HNHc CwlT_like RVT-GII HNHc CwlT_like Spr Feature: gene Location: 1722-2126 bp Feature: domain Description: TcpE Location: 1758-2034 bp Feature: domain Description: TcpE Location: 1 758-2034 bp Feature: gene Location: 2186-4579 bp Feature: domain Description: VirB4_CagE Location: 2213-3317 bp Feature: domain Description: VirB4_CagE Location: 221 3-331 7 bp Feature: domain Description: AAA_10 Location: 3527-4553 bp Feature: domain Description: AAA_1 0 Location: 3527-4553 bp Feature: gene Location: 5146-6954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5410-6235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 0-6235 bp Feature: domain Description: Intron_maturas2 Location: 6334-6625 bp Feature: domain Description: Intron_maturas2 Location: 6334-6625 bp Feature: domain Description: HNHc Note: nucleases Location: 6781-6928 bp Feature: domain Description: HNHc Note: nucleases Location: 6781 -6928 bp Feature: gene Location: 7072-7224 bp Feature: gene Location: 7226-7708 bp Feature: gene Location: 7740-10118 bp Feature: gene Location: 10146-10784 bp Feature: domain Description: CwlT_like Location: 10521-10767 bp Feature: domain Description: CwlT_like Location: 1 0521 -1 0767 bp Feature: gene Location: 11628-13337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11814-12519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 81 4-1 251 9 bp Feature: domain Description: HNHc Note: nucleases Location: 13083-13215 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3083-1 321 5 bp Feature: gene Location: 13350-14063 bp Feature: domain Description: CwlT_like Location: 13449-13638 bp Feature: domain Description: CwlT_like Location: 1 3449-1 3638 bp Feature: domain Description: Spr Location: 13674-14046 bp Feature: domain Description: Spr Location: 1 3674-1 4046 bp Feature: gene Location: 14115-14711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), VirB4_CagE (TIGR00929), AAA_10 (pfam12846), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, Spr (COG0791)

Seq: NVFE01000304.1 Bacillus toyonensis strain AFS086130 AFS086130_71_D6_Contig304_140411, whole genome shotgun sequence (6433 bp)
Overview 1 RT 1: 126-4682 bp Neighborhood of RT #1 [126, 4682] DUF3854 RVT-GII GIIM Feature: gene Location: 126-488 bp Feature: domain Description: DUF3854 Location: 219-456 bp Feature: domain Description: DUF3854 Location: 2 19-456 bp Feature: gene Location: 598-2475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 2 -1618 bp Feature: domain Description: GIIM Note: maturase Location: 1702-1879 bp Feature: domain Description: GIIM Note: maturase Location: 1702 -1879 bp Feature: gene Location: 3185-4198 bp Feature: gene Location: 4530-4682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), RVT-GII, GIIM (pfam08388)

Seq: NVFE01000395.1 Bacillus toyonensis strain AFS086130 AFS086130_71_D6_Contig395_140411, whole genome shotgun sequence (7171 bp)
Overview 1 RT 1: 4689-7032 bp Neighborhood of RT #1 [4689, 7169] SLATT_5 RVT-UG17 Feature: gene Location: 4689-5309 bp Feature: gene Location: 5576-6223 bp Feature: domain Description: SLATT_5 Location: 5675-6203 bp Feature: domain Description: SLATT_5 Location: 5675-6203 bp Feature: gene Location: 6225-7169 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6453-7032 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6453 -703 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17