myRT

myRT report for GCA_002569365.1_ASM256936v1

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Seq: NVFG01000023.1 Bacillus toyonensis strain AFS085003 AFS085003_71_G3_Contig23_140411, whole genome shotgun sequence (101291 bp)
Overview 1 RT 1: 72332-76122 bp Neighborhood of RT #1 [72332, 76127] SLATT_5 RVT-UG17 Phage_integrase Phage_int_SAM_5 Feature: gene Location: 72332-72952 bp Feature: gene Location: 73219-73866 bp Feature: domain Description: SLATT_5 Location: 73318-73846 bp Feature: domain Description: SLATT_5 Location: 7331 8-73846 bp Feature: gene Location: 73868-75235 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 74096-74675 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 74096-74675 bp Feature: gene Location: 75483-75821 bp Feature: domain Description: Phage_integrase Location: 75492-75810 bp Feature: domain Description: Phage_integrase Location: 75492-7581 0 bp Feature: gene Location: 75867-76127 bp Feature: domain Description: Phage_int_SAM_5 Location: 75873-76122 bp Feature: domain Description: Phage_int_SAM_5 Location: 75873-761 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Phage_integrase (pfam00589), Phage_int_SAM_5 (pfam13102)

Seq: NVFG01000054.1 Bacillus toyonensis strain AFS085003 AFS085003_71_G3_Contig54_140411, whole genome shotgun sequence (32698 bp)
Overview 1 RT 1: 14750-27647 bp Neighborhood of RT #1 [14750, 27739] CwlT_like Spr RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc VirB4_CagE AAA_10 TcpE Feature: gene Location: 14750-15346 bp Feature: gene Location: 15398-16111 bp Feature: domain Description: CwlT_like Location: 15497-15686 bp Feature: domain Description: CwlT_like Location: 15497-15686 bp Feature: domain Description: Spr Location: 15722-16094 bp Feature: domain Description: Spr Location: 1572 2 -16094 bp Feature: gene Location: 16124-17833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16310-17015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16310-17015 bp Feature: domain Description: HNHc Note: nucleases Location: 17579-17711 bp Feature: domain Description: HNHc Note: nucleases Location: 17579-17711 bp Feature: gene Location: 18677-19315 bp Feature: domain Description: CwlT_like Location: 19052-19298 bp Feature: domain Description: CwlT_like Location: 19052 -192 98 bp Feature: gene Location: 19343-21721 bp Feature: gene Location: 21753-22235 bp Feature: gene Location: 22237-22389 bp Feature: gene Location: 22507-24315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22771-23596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 771-2 3596 bp Feature: domain Description: Intron_maturas2 Location: 23695-23986 bp Feature: domain Description: Intron_maturas2 Location: 2 3695-2 3986 bp Feature: domain Description: HNHc Note: nucleases Location: 24142-24289 bp Feature: domain Description: HNHc Note: nucleases Location: 2 4142 -2 42 89 bp Feature: gene Location: 24882-27275 bp Feature: domain Description: VirB4_CagE Location: 24909-26013 bp Feature: domain Description: VirB4_CagE Location: 2 4909-2 6013 bp Feature: domain Description: AAA_10 Location: 26223-27249 bp Feature: domain Description: AAA_10 Location: 2 62 2 3-2 72 49 bp Feature: gene Location: 27335-27739 bp Feature: domain Description: TcpE Location: 27371-27647 bp Feature: domain Description: TcpE Location: 2 7371-2 7647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, Spr (COG0791), RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), VirB4_CagE (TIGR00929), AAA_10 (pfam12846), TcpE (pfam12648)

Seq: NVFG01000006.1 Bacillus toyonensis strain AFS085003 AFS085003_71_G3_Contig6_140411, whole genome shotgun sequence (42684 bp)
Overview 1 RT 1: 21732-26566 bp Neighborhood of RT #1 [21732, 26566] RVT-GII GIIM DUF3854 Feature: gene Location: 21732-22745 bp Feature: gene Location: 23038-23226 bp Feature: gene Location: 23455-25332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23779-24475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 779-24475 bp Feature: domain Description: GIIM Note: maturase Location: 24559-24736 bp Feature: domain Description: GIIM Note: maturase Location: 24559-2473 6 bp Feature: gene Location: 25442-25804 bp Feature: domain Description: DUF3854 Location: 25535-25772 bp Feature: domain Description: DUF3 854 Location: 2553 5-25772 bp Feature: gene Location: 26336-26566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3854 (pfam12965)