myRT

myRT report for GCA_002570045.1_ASM257004v1

Download annotations/find similar RTs

Seq: NVHK01000198.1 Bacillus toyonensis strain AFS073128 AFS073128_71_D4_Contig198_140411, whole genome shotgun sequence (720 bp)
Overview 1 RT 1: 3-720 bp Neighborhood of RT #1 [3, 719] RVT-UG17 Feature: gene Location: 3-719 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 156-720 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 56-720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: NVHK01000479.1 Bacillus toyonensis strain AFS073128 AFS073128_71_D4_Contig253_140411, whole genome shotgun sequence (9643 bp)
Overview 1 RT 1: 2045-7939 bp Neighborhood of RT #1 [2045, 8031] RVT-GII Intron_maturas2 HNHc VirB4_CagE AAA_10 TcpE Feature: gene Location: 2045-2527 bp Feature: gene Location: 2529-2681 bp Feature: gene Location: 2799-4607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3063-3888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3063-3888 bp Feature: domain Description: Intron_maturas2 Location: 3987-4278 bp Feature: domain Description: Intron_maturas2 Location: 3987-42 78 bp Feature: domain Description: HNHc Note: nucleases Location: 4434-4581 bp Feature: domain Description: HNHc Note: nucleases Location: 4434-4581 bp Feature: gene Location: 5174-7567 bp Feature: domain Description: VirB4_CagE Location: 5201-6305 bp Feature: domain Description: VirB4_CagE Location: 52 01-6305 bp Feature: domain Description: AAA_10 Location: 6515-7541 bp Feature: domain Description: AAA_10 Location: 6515-7541 bp Feature: gene Location: 7627-8031 bp Feature: domain Description: TcpE Location: 7663-7939 bp Feature: domain Description: TcpE Location: 7663-7939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), VirB4_CagE (TIGR00929), AAA_10 (pfam12846), TcpE (pfam12648)

Seq: NVHK01000491.1 Bacillus toyonensis strain AFS073128 AFS073128_71_D4_Contig265_140411, whole genome shotgun sequence (5917 bp)
Overview 1 RT 1: 939-5915 bp Neighborhood of RT #1 [939, 5915] CwlT_like Spr RVT-GII HNHc CwlT_like Feature: gene Location: 939-1535 bp Feature: gene Location: 1587-2300 bp Feature: domain Description: CwlT_like Location: 1686-1875 bp Feature: domain Description: CwlT_like Location: 1686-1875 bp Feature: domain Description: Spr Location: 1911-2283 bp Feature: domain Description: Spr Location: 1911-2283 bp Feature: gene Location: 2313-4022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2499-3204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2499-3 204 bp Feature: domain Description: HNHc Note: nucleases Location: 3768-3900 bp Feature: domain Description: HNHc Note: nucleases Location: 3 768-3 900 bp Feature: gene Location: 4866-5504 bp Feature: domain Description: CwlT_like Location: 5241-5487 bp Feature: domain Description: CwlT_like Location: 5241-5487 bp Feature: gene Location: 5532-5915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: NVHK01000508.1 Bacillus toyonensis strain AFS073128 AFS073128_71_D4_Contig282_140411, whole genome shotgun sequence (6519 bp)
Overview 1 RT 1: 2106-6146 bp Neighborhood of RT #1 [2106, 6178] RVT-GII GIIM DUF3854 Feature: gene Location: 2106-3119 bp Feature: gene Location: 3412-3600 bp Feature: gene Location: 3829-5706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4153-4849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 153-4 84 9 bp Feature: domain Description: GIIM Note: maturase Location: 4933-5110 bp Feature: domain Description: GIIM Note: maturase Location: 4 933-5110 bp Feature: gene Location: 5816-6178 bp Feature: domain Description: DUF3854 Location: 5909-6146 bp Feature: domain Description: DUF3854 Location: 5909-614 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3854 (pfam12965)