myRT

myRT report for GCA_002570305.1_ASM257030v1

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Seq: NVHW01000011.1 Bacillus wiedmannii strain AFS070970 AFS070970_100_H1_Contig11_140514, whole genome shotgun sequence (94753 bp)
Overview 1 RT 1: 37628-41968 bp Neighborhood of RT #1 [37628, 41976] PRK00024 RVT-UG3 PurR Feature: gene Location: 37628-38080 bp Feature: domain Description: PRK00024 Location: 37694-38075 bp Feature: domain Description: PRK00024 Location: 37694-38075 bp Feature: gene Location: 38417-38560 bp Feature: gene Location: 38792-39931 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 38972-39431 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 38972-39431 bp Feature: gene Location: 40225-40602 bp Feature: gene Location: 40975-41976 bp Feature: domain Description: PurR Location: 40984-41968 bp Feature: domain Description: PurR Location: 40984-41 968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT-UG3, PurR (COG1609)

Seq: NVHW01000037.1 Bacillus wiedmannii strain AFS070970 AFS070970_100_H1_Contig58_140514, whole genome shotgun sequence (19463 bp)
Overview 1 RT 1: 2-4317 bp Neighborhood of RT #1 [2, 4445] RVT-UG12 Phage_int_SAM_5 INT_ICEBs1_C_like Rol_Rep_N Rep_trans Feature: gene Location: 2-1717 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 320-776 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 32 0-776 bp Feature: gene Location: 1937-3193 bp Feature: domain Description: Phage_int_SAM_5 Location: 2216-2474 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 2 16-2 474 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2528-3065 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 52 8-3065 bp Feature: gene Location: 3417-4445 bp Feature: domain Description: Rol_Rep_N Location: 3441-3711 bp Feature: domain Description: Rol_Rep_N Location: 3441-3711 bp Feature: domain Description: Rep_trans Location: 3735-4317 bp Feature: domain Description: Rep_trans Location: 3735-4317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: NVHW01000004.1 Bacillus wiedmannii strain AFS070970 AFS070970_100_H1_Contig7_140514, whole genome shotgun sequence (58375 bp)
Overview 1 RT 1: 10568-15792 bp Neighborhood of RT #1 [10568, 15792] CwlT_like RVT-GII HNHc CwlT_like Spr Feature: gene Location: 10568-11014 bp Feature: gene Location: 11227-11865 bp Feature: domain Description: CwlT_like Location: 11602-11848 bp Feature: domain Description: CwlT_like Location: 11602-11848 bp Feature: gene Location: 12709-14418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12895-13600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12895-13 600 bp Feature: domain Description: HNHc Note: nucleases Location: 14164-14296 bp Feature: domain Description: HNHc Note: nucleases Location: 14164-14296 bp Feature: gene Location: 14431-15144 bp Feature: domain Description: CwlT_like Location: 14530-14719 bp Feature: domain Description: CwlT_like Location: 1453 0-14719 bp Feature: domain Description: Spr Location: 14758-15127 bp Feature: domain Description: Spr Location: 14758-15127 bp Feature: gene Location: 15196-15792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507), Spr (COG0791)