myRT

myRT report for GCA_002570585.1_ASM257058v1

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Seq: NVDY01000025.1 Bacillus thuringiensis strain AFS059914 AFS059914_115_A9_Contig25_140618, whole genome shotgun sequence (38188 bp)
Overview 1 RT 1: 363-3873 bp Neighborhood of RT #1 [363, 3908] RVT-GII HNHc PRK00024 HipB Feature: gene Location: 363-542 bp Feature: gene Location: 761-2644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058-1799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 058-1 799 bp Feature: domain Description: HNHc Note: nucleases Location: 2363-2531 bp Feature: domain Description: HNHc Note: nucleases Location: 2363-2531 bp Feature: gene Location: 2803-2937 bp Feature: domain Description: PRK00024 Location: 2812-2932 bp Feature: domain Description: PRK00024 Location: 281 2-2932 bp Feature: gene Location: 3585-3908 bp Feature: domain Description: HipB Location: 3588-3873 bp Feature: domain Description: HipB Location: 3588-3873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK00024 (DNA repair protein RadC), HipB (COG1396)

Seq: NVDY01000029.1 Bacillus thuringiensis strain AFS059914 AFS059914_115_A9_Contig29_140618, whole genome shotgun sequence (28213 bp)
Overview 1 RT 1: 1-4918 bp Neighborhood of RT #1 [1, 4938] RadC RVT-GII HNHc PRK13927 PRK13922 Feature: gene Location: 1-132 bp Feature: domain Description: RadC Location: 25-121 bp Feature: domain Description: RadC Location: 2 5-12 1 bp Feature: gene Location: 833-2704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1154-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1154-1862 bp Feature: domain Description: HNHc Note: nucleases Location: 2456-2624 bp Feature: domain Description: HNHc Note: nucleases Location: 2 456-2 62 4 bp Feature: gene Location: 3026-4045 bp Feature: domain Description: PRK13927 Location: 3044-4034 bp Feature: domain Description: PRK1392 7 Location: 3044-4034 bp Feature: gene Location: 4087-4938 bp Feature: domain Description: PRK13922 Location: 4090-4918 bp Feature: domain Description: PRK1392 2 Location: 4090-4918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: NVDY01000061.1 Bacillus thuringiensis strain AFS059914 AFS059914_115_A9_Contig61_140618, whole genome shotgun sequence (92069 bp)
Overview 1 RT 1: 24657-30773 bp Neighborhood of RT #1 [24657, 30773] RE_Bsp6I RVT-UG2 Feature: gene Location: 24657-25559 bp Feature: gene Location: 25984-26445 bp Feature: domain Description: RE_Bsp6I Location: 26008-26308 bp Feature: domain Description: RE_Bsp6I Location: 26008-263 08 bp Feature: gene Location: 26844-28136 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 27018-27837 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 27018-2783 7 bp Feature: gene Location: 29262-30269 bp Feature: gene Location: 30381-30773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RE_Bsp6I (pfam09504), RVT-UG2